Detail information of GWHGAAEX003338/CADD00300.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04023.00E-1160S ribosomal protein L37
nrgi|388521597|gb|AFK48860.1|3.92E-10unknown [Medicago truncatula]
Swissprottr|Q9XHE4|RL37A_GOSHI5.00E-1260S ribosomal protein L37a
trEMBLtr|I3T8L8|I3T8L8_MEDTR1.00E-10Uncharacterized protein {ECO:0000313|EMBL:AFK48860.1}
TAIRAT3G109503.00E-11Zinc-binding ribosomal protein family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000142939570940167+
Transcript Sequence

Network for GWHGAAEX003338

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01780.18Ribosomal_L37ae2288.00E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02921RP-L37Ae, RPL37A Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.660
SRR2545915Juvenile tuber9.550
SRP108465SRR5643513five period of Gastrodia elata93.260
SRR5643514five period of Gastrodia elata119.250
SRR5643515five period of Gastrodia elata95.860
SRR5643524five period of Gastrodia elata113.410
SRR5643525five period of Gastrodia elata101.600
SRR5643528five period of Gastrodia elata80.160
SRR5643658five period of Gastrodia elata96.510
SRR5643659five period of Gastrodia elata71.780
SRR5643660five period of Gastrodia elata58.920
SRR5643661five period of Gastrodia elata63.900
SRR5643662five period of Gastrodia elata67.000
SRR5643663five period of Gastrodia elata63.020
SRR5643664five period of Gastrodia elata41.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.660
SRR6049655Rhizomagastrodiae_C368-T10_good_13.820
SRR6049656Rhizomagastrodiae_C368-T07_good_122.470
SRR6049657Rhizomagastrodiae_C368-T07_good_119.840
SRR6049658Rhizomagastrodiae_C368-T04_good_10.610
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_17.320
SRR6049661Rhizomagastrodiae_C368-T04_good_10.660
SRR6049662Rhizomagastrodiae_C368-T01_good_14.760
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_162.630
SRR6049665Rhizomagastrodiae_C368-T10_good_162.630
SRP279888GastroGastrodia elata tuber 43.74
JuvenJuvenile tuber34.21
Mother_GastroMother tuber of Gastrodia elata 35.36
Mother_JuvenMother tuber of Juvenile 37.12