Detail information of GWHGAAEX003347/evm.TU.scaffold_133.43
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|469817498|ref|YP_007589582.1| | 1.00E-06 | 3-demethylubiquinone-9 3-methyltransferase [Rhodanobacter denitrificans] |
| KOG | KOG1270 | 8.00E-10 | Methyltransferases |
| nr | gi|255562502|ref|XP_002522257.1| | 9.56E-16 | hexaprenyldihydroxybenzoate methyltransferase, putative [Ricinus communis] |
| Swissprot | tr|O49354|COQ3_ARATH | 2.00E-10 | Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial (Precursor) |
| trEMBL | tr|B9S8D8|B9S8D8_RICCO | 4.00E-16 | Hexaprenyldihydroxybenzoate methyltransferase, putative {ECO:0000313|EMBL:EEF40115.1} |
| TAIR | AT2G30920 | 8.00E-10 | coenzyme Q 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000142 | 1927666 | 1931925 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003347
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00591 | COQ3 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.330 |
| SRR2545915 | Juvenile tuber | 0.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.410 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.380 | |
| SRR5643524 | five period of Gastrodia elata | 0.330 | |
| SRR5643525 | five period of Gastrodia elata | 0.510 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 1.100 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.830 | |
| SRR5643664 | five period of Gastrodia elata | 0.340 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.980 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.420 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.840 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.440 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.050 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.390 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.360 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.420 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.350 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.350 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.52 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.95 | |
| Mother_Juven | Mother tuber of Juvenile | 0.26 |