Detail information of GWHGAAEX003350/evm.TU.scaffold_133.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389872842|ref|YP_006380261.1|3.00E-393-hydroxyisobutyrate dehydrogenase [Advenella kashmirensis WT001]
KOGKOG04097.00E-73Predicted dehydrogenase
nrgi|743803488|ref|XP_010926933.1|1.08E-102PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial isoform X2 [Elaeis guineensis]
Swissprottr|Q9SUC0|3HIDH_ARATH1.00E-77Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial (Precursor)
trEMBLtr|A0A096PZ88|A0A096PZ88_MAIZE6.00E-94Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G014813_P03}
TAIRAT4G209307.00E-736-phosphogluconate dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014219889662018859-
Transcript Sequence

Network for GWHGAAEX003350

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03446.14NAD_binding_2442152.30E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00020mmsB, HIBADH Metabolic pathways map01100
Carbon metabolismmap01200
Propanoate metabolismmap00640
Cysteine and methionine metabolismmap00270
beta-Alanine metabolismmap00410

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0050661Molecular FunctionNADP binding
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.420
SRR2545915Juvenile tuber12.230
SRP108465SRR5643513five period of Gastrodia elata6.520
SRR5643514five period of Gastrodia elata8.990
SRR5643515five period of Gastrodia elata8.280
SRR5643524five period of Gastrodia elata6.380
SRR5643525five period of Gastrodia elata2.960
SRR5643528five period of Gastrodia elata4.840
SRR5643658five period of Gastrodia elata4.500
SRR5643659five period of Gastrodia elata3.480
SRR5643660five period of Gastrodia elata3.540
SRR5643661five period of Gastrodia elata4.730
SRR5643662five period of Gastrodia elata4.860
SRR5643663five period of Gastrodia elata4.110
SRR5643664five period of Gastrodia elata3.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.760
SRR6049655Rhizomagastrodiae_C368-T10_good_18.860
SRR6049656Rhizomagastrodiae_C368-T07_good_111.750
SRR6049657Rhizomagastrodiae_C368-T07_good_110.770
SRR6049658Rhizomagastrodiae_C368-T04_good_17.790
SRR6049659Rhizomagastrodiae_C368-T04_good_111.710
SRR6049660Rhizomagastrodiae_C368-T01_good_18.350
SRR6049661Rhizomagastrodiae_C368-T04_good_19.320
SRR6049662Rhizomagastrodiae_C368-T01_good_19.690
SRR6049663Rhizomagastrodiae_C368-T01_good_110.110
SRR6049664Rhizomagastrodiae_C368-T10_good_18.790
SRR6049665Rhizomagastrodiae_C368-T10_good_18.790
SRP279888GastroGastrodia elata tuber 7.94
JuvenJuvenile tuber4.23
Mother_GastroMother tuber of Gastrodia elata 6.37
Mother_JuvenMother tuber of Juvenile 6.71