Detail information of GWHGAAEX003351/evm.TU.scaffold_133.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|470183778|ref|YP_007569653.1|3.00E-433-hydroxyisobutyrate dehydrogenase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
KOGKOG04092.00E-71Predicted dehydrogenase
nrgi|743803488|ref|XP_010926933.1|3.35E-80PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial isoform X2 [Elaeis guineensis]
Swissprottr|Q9SUC0|3HIDH_ARATH3.00E-72Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial (Precursor)
trEMBLtr|M0U4V3|M0U4V3_MUSAM4.00E-793-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}
TAIRAT4G209302.00E-716-phosphogluconate dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014220263842060660-
Transcript Sequence

Network for GWHGAAEX003351

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03446.14NAD_binding_2841309.00E-12
PF14833.5NAD_binding_111332391.10E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00020mmsB, HIBADH Metabolic pathways map01100
Carbon metabolismmap01200
Propanoate metabolismmap00640
Cysteine and methionine metabolismmap00270
beta-Alanine metabolismmap00410

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0050661Molecular FunctionNADP binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0051287Molecular FunctionNAD binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.190
SRR2545915Juvenile tuber0.800
SRP108465SRR5643513five period of Gastrodia elata0.260
SRR5643514five period of Gastrodia elata0.390
SRR5643515five period of Gastrodia elata0.720
SRR5643524five period of Gastrodia elata1.160
SRR5643525five period of Gastrodia elata1.170
SRR5643528five period of Gastrodia elata0.780
SRR5643658five period of Gastrodia elata0.290
SRR5643659five period of Gastrodia elata0.730
SRR5643660five period of Gastrodia elata1.370
SRR5643661five period of Gastrodia elata0.460
SRR5643662five period of Gastrodia elata0.810
SRR5643663five period of Gastrodia elata0.700
SRR5643664five period of Gastrodia elata1.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.210
SRR6049655Rhizomagastrodiae_C368-T10_good_12.720
SRR6049656Rhizomagastrodiae_C368-T07_good_114.510
SRR6049657Rhizomagastrodiae_C368-T07_good_112.200
SRR6049658Rhizomagastrodiae_C368-T04_good_116.720
SRR6049659Rhizomagastrodiae_C368-T04_good_125.860
SRR6049660Rhizomagastrodiae_C368-T01_good_118.220
SRR6049661Rhizomagastrodiae_C368-T04_good_121.530
SRR6049662Rhizomagastrodiae_C368-T01_good_116.810
SRR6049663Rhizomagastrodiae_C368-T01_good_120.340
SRR6049664Rhizomagastrodiae_C368-T10_good_17.200
SRR6049665Rhizomagastrodiae_C368-T10_good_17.200
SRP279888GastroGastrodia elata tuber 13.17
JuvenJuvenile tuber0.55
Mother_GastroMother tuber of Gastrodia elata 8.60
Mother_JuvenMother tuber of Juvenile 0.49