Detail information of GWHGAAEX003371/evm.TU.scaffold_134.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28502.00E-25Predicted peptidoglycan-binding protein, contains LysM domain
nrgi|743873170|ref|XP_010906748.1|5.53E-65PREDICTED: uncharacterized protein LOC105033582 [Elaeis guineensis]
Swissprottr|Q9FZ32|FB60_ARATH1.00E-06F-box protein At1g55000
trEMBLtr|M0RNK4|M0RNK4_MUSAM2.00E-52Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P01740_001}
TAIRAT5G08200_12.00E-25Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000139262724266770+
Transcript Sequence

Network for GWHGAAEX003371

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01476.19LysM651080.00038
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.820
SRR2545915Juvenile tuber20.360
SRP108465SRR5643513five period of Gastrodia elata28.370
SRR5643514five period of Gastrodia elata10.560
SRR5643515five period of Gastrodia elata51.850
SRR5643524five period of Gastrodia elata12.220
SRR5643525five period of Gastrodia elata54.550
SRR5643528five period of Gastrodia elata48.420
SRR5643658five period of Gastrodia elata15.490
SRR5643659five period of Gastrodia elata53.120
SRR5643660five period of Gastrodia elata28.800
SRR5643661five period of Gastrodia elata40.750
SRR5643662five period of Gastrodia elata80.480
SRR5643663five period of Gastrodia elata52.390
SRR5643664five period of Gastrodia elata96.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.110
SRR6049655Rhizomagastrodiae_C368-T10_good_132.320
SRR6049656Rhizomagastrodiae_C368-T07_good_140.410
SRR6049657Rhizomagastrodiae_C368-T07_good_143.130
SRR6049658Rhizomagastrodiae_C368-T04_good_126.690
SRR6049659Rhizomagastrodiae_C368-T04_good_125.210
SRR6049660Rhizomagastrodiae_C368-T01_good_169.930
SRR6049661Rhizomagastrodiae_C368-T04_good_125.330
SRR6049662Rhizomagastrodiae_C368-T01_good_131.560
SRR6049663Rhizomagastrodiae_C368-T01_good_159.370
SRR6049664Rhizomagastrodiae_C368-T10_good_125.310
SRR6049665Rhizomagastrodiae_C368-T10_good_125.310
SRP279888GastroGastrodia elata tuber 26.76
JuvenJuvenile tuber9.86
Mother_GastroMother tuber of Gastrodia elata 103.53
Mother_JuvenMother tuber of Juvenile 23.61