Detail information of GWHGAAEX003374/evm.TU.scaffold_134.16
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428310120|ref|YP_007121097.1| | 3.00E-33 | cytochrome P450 [Microcoleus sp. PCC 7113] |
| KOG | KOG0157 | 0 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|514816081|ref|XP_004982787.1| | 0 | PREDICTED: cytochrome P450 86B1-like [Setaria italica] |
| Swissprot | tr|Q9FMY1|C86B1_ARATH | 0 | Cytochrome P450 86B1 |
| trEMBL | tr|K4A6Y3|K4A6Y3_SETIT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si034638m} |
| TAIR | AT5G08250 | 0 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000139 | 371875 | 377111 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003374
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 102 | 498 | 9.60E-58 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP86B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K15402 | CYP86B1 | Synthesis and degradation of ketone bodies | map00072 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0004497 | Molecular Function | monooxygenase activity |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.860 |
| SRR2545915 | Juvenile tuber | 6.640 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.190 |
| SRR5643514 | five period of Gastrodia elata | 3.030 | |
| SRR5643515 | five period of Gastrodia elata | 10.570 | |
| SRR5643524 | five period of Gastrodia elata | 7.130 | |
| SRR5643525 | five period of Gastrodia elata | 1.730 | |
| SRR5643528 | five period of Gastrodia elata | 2.200 | |
| SRR5643658 | five period of Gastrodia elata | 1.830 | |
| SRR5643659 | five period of Gastrodia elata | 13.690 | |
| SRR5643660 | five period of Gastrodia elata | 9.490 | |
| SRR5643661 | five period of Gastrodia elata | 12.950 | |
| SRR5643662 | five period of Gastrodia elata | 8.430 | |
| SRR5643663 | five period of Gastrodia elata | 6.730 | |
| SRR5643664 | five period of Gastrodia elata | 8.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 13.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.560 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 14.090 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.900 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.410 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 27.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 12.880 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.010 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.840 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.840 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.05 |
| Juven | Juvenile tuber | 22.39 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 53.99 | |
| Mother_Juven | Mother tuber of Juvenile | 85.39 |