Gene detail

Detail information of GWHGAAEX003381/evm.TU.scaffold_134.25

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672141424\|ref\|XP_008794542.1\|	0	PREDICTED: myosin-J heavy chain [Phoenix dactylifera]
trEMBL	tr\|I1I578\|I1I578_BRADI	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI3G30277.1}
TAIR	AT5G41140	8.00E-152	Myosin heavy chain-related protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000139	661582	666463	+

Transcript Sequence
>GWHTAAEX003381 ATGAGGAAGAAGCTTGCAGATCAAAAGATGTTCAAGGCGGCGAGATGGAAGAGCGAGAAGATTAACAAGATTGACGCCGTGTTCAAATTTCAGTTCAAGGCAAAGCAGATTCCTCATCCGGGATGGGAGGAGCTGATGGTTTCTCTTTTACCGGTGGATTCCGGCAAGCCGACGGCGAGAACGGAGAAGGCAGCAGTTGTCGACGGATCAAGCAACTGGGCGACTCCGGTGTACGAATCTGTGAAGCTGATCCAGGATTTAAAAACGGGAAAGATCAATGAGAAGGCTTACCTTTTTATTCTCTCTTCTACTGGTTCGCTGAAACTAGGAGTTTTGGGGGACAGCAGCATTAACCTAGCGGATTACGTTGAGGCCTTCAAACCCTCTTCTGTCTCTCTGCTTCTCAATGCACCTAATGCTGAAACAATTCTTCATATTACTGTCCAAAGAGTGCAGAGTGAAGCAGAAGGAAGAGGATTGAATGAGGATGGAGATACATCTATGAGGCTTCAGCGAATAACTCTAAAAAGTGAATTGGAGAATTCTGAGATGGAAGGAAATGCACTGGCCAAAAGTTACAATGGCATCAAAGACAGAGCGGAGATTTCACATGTCAATAGCCCGGTAAAAATGAAATTTTCATATGGCAGAACTATGACTGTCCAGGTCAAATCTAACGGCAACCTCATAAAATCCAATAGCTTGGATGCCATATCAGCTTCTGGTTCAGACACCAGCTCAGGATACACCCCAAAGGAGAATGGAGCTAAGAATAATATCTCCCAACAAGAATATGGAAGCATTTTATCTCCTCTAAGCAGCACCGACACTCCTAGAGATCCTGTCATTTCATCAGCTCATGATTGGTCCATCGTTTCAGCTGCTTATGGTAGTCTTGATGGATCAAGCAGTACTTCTGGGGAGGCACTATTGAGAGAAGGAAGCCAAGAATCAGATAATAATACTGTGGAAAAGCATAGCGATGATGTGATTGTTTTGACAAGGCAACTGGAAGTATCTAACATGGAACTACAAACTCTCAGAAAGCAAGTTGTCAAGGAGAGCAGGCGGGGACACGATCTTGCAAGGCTGATGCAAAATATAAAGGATGAAAGAGATGCACTTGAGAGAGAATGTGCAGAATTCAAGGCTTTAAGAAATAGAGCAATTGATGATGAACATTTTTCATCTAAGTTACAGTTTGGAGGTAAAGATATATGGTCAATACTTGAAGAAACAAAGCAAGAGCTGAATCATGAGAAAAGGCTGAACGAGAGCCTTCATTTGCAGCTGAATAAGATAAATGAATCTAATGCTGAGCTGATTCACGTGGTGAAGGATTTGGAGGAGTTACTACAGCAGAAAAATGGAGAATGCTCATCTGATGGCTGCAGCGGTTCTTCAATCAATCCAGATGTTATGAAGGATTTGGAAGAAGTTAAGTTTAAATTTAGATTAGCTCAGCAATTGCAAAGCTCTGAAAGCCTGCAAGACTCTCTCGAAACTTCAATACATGTGGAAGATGAACAATACTCTCTCGATGTGCTTGTCAAGAAGCCTGGAAATGCTGATGCATTTAGTTCTCCAGATCAGAAAATGGCACATCTAATCACCGAGTTAGAACTATATAAGAAGGAACGTGAGGAAATAGAAATGCAGATGGAACAGCTCGCTCTTGACTATGAGATTTTAAAACAGGAAAACCACGACGTTTCAAAAAAGCTGGAGCAAATTCAACTGAGGGAACAGTTAAGGATGCAGTTTGATTGTTCAACACATTTTGCTTCAGTTAGTGAGTTAGAAGCACAGATTGAGAGCTTGGAAAATGAAATAGCGAGACAAGCAGAAGCATTTCAAGCTGATCTGGAGATCCTTAGTAGAGCCAAAACTGAGCAGGAGAAAAGGGCCATTCAAGCTGAGGAAGAGCTGAGGAACGTAAGACGGTATAGTAATAACACTGCTGAACAGCTGCAAACAGAATTCAAGAGGCTCACAGAACATATGTCATCTACATTTTCTATGAATGAGAGGCTGGTTTTACAAGTACTTCAAGAATCTAGTGAACTACAATTGCAAAAGTGCCATCTAGAAGAGATGTTAGAGAAGAAAAATAAGGAACTTGTATTGGTGAAGCAGCAGCACAATATCAAATTCCAGCAGCTGTTAAGCCTAGTAGATTTAAAAACTAAGGAAGCTGACAGCCTGCTTTCAGAACTCAAGGAAAAGCGTAAGGAGCTTGAAAACAAAAGGTTGGGTGAAGAATCAAGGCAAAAGGCTTCCTCCGAGAAAATTGCACGGCTTACAACTGAAATGGAAATGCTCTCCAGAAAAAGTGAATCTCTTTGTGAACAGATAAAAATTGAGGAAAATTTGACTGAAGAGATGAACCAGCTGAAAACGTCCATGGCTGAGAGAAATGTGCTGTTGCAAATTTGCAAAAAGGAAAAATCTATGCATGAGCCGGACTTTTCTTTCTTAAAAGAGGAAGCAAAGATGCCACTTAAGGAGCTGAATGACCTCATGAAGATAAATTTTGAAAATGATGCCTCCATTAGAAATCCGGATGCAGATGTAACACTGCTTATAGCCCAGTATGATGGTATGAAGCATTCCCTGTTTAAGCAGGAACTGGAACAAGAGAACCTACTGAAGGAAGCAAGTCTAATTGATATTATTGAGAAGAAGCTCGAGGACTACAATCCAGAGTTTAAAAAATCATCAGCAAGGAGTAAGATTAGTATATCTACACGGCCACAACATGTGTTCCATGAGAGTGCTAGAATTAATGGAGATTATGCGATAAAACACGTCATGGAAGGCAAGAAAAAGATAAAGGATTTAAGCAGCATTGGCACGCCTTTAATTATAAGTAACATTGATGGTAATTCAGAGATACTGGATGACGGATCAATCTGTTGCACTTACGAACAGGAAAAGGCTTCCGAAGTATATGAGGAGATGGAAGGGCTGAGAGAACAAAATCGTATAATGGAAACTGAGCTGGAAGACTTGCAACAAAGATATTCTGAAGTGAGCCTAAAATTTGCTGAAGTTGAAGGGGAAAGGCAACAGCTTGTAATTAAAGTTCGCAGTCTTAAAAGTTCTTTGACTATTGTTTGA

Network for GWHGAAEX003381

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10358.8	NT-C2	21	154	4.30E-10

Protein Sequence

>GWHPAAEX003381
MRKKLADQKMFKAARWKSEKINKIDAVFKFQFKAKQIPHPGWEELMVSLLPVDSGKPTARTEKAAVVDGSSNWATPVYESVKLIQDLKTGKINEKAYLFILSSTGSLKLGVLGDSSINLADYVEAFKPSSVSLLLNAPNAETILHITVQRVQSEAEGRGLNEDGDTSMRLQRITLKSELENSEMEGNALAKSYNGIKDRAEISHVNSPVKMKFSYGRTMTVQVKSNGNLIKSNSLDAISASGSDTSSGYTPKENGAKNNISQQEYGSILSPLSSTDTPRDPVISSAHDWSIVSAAYGSLDGSSSTSGEALLREGSQESDNNTVEKHSDDVIVLTRQLEVSNMELQTLRKQVVKESRRGHDLARLMQNIKDERDALERECAEFKALRNRAIDDEHFSSKLQFGGKDIWSILEETKQELNHEKRLNESLHLQLNKINESNAELIHVVKDLEELLQQKNGECSSDGCSGSSINPDVMKDLEEVKFKFRLAQQLQSSESLQDSLETSIHVEDEQYSLDVLVKKPGNADAFSSPDQKMAHLITELELYKKEREEIEMQMEQLALDYEILKQENHDVSKKLEQIQLREQLRMQFDCSTHFASVSELEAQIESLENEIARQAEAFQADLEILSRAKTEQEKRAIQAEEELRNVRRYSNNTAEQLQTEFKRLTEHMSSTFSMNERLVLQVLQESSELQLQKCHLEEMLEKKNKELVLVKQQHNIKFQQLLSLVDLKTKEADSLLSELKEKRKELENKRLGEESRQKASSEKIARLTTEMEMLSRKSESLCEQIKIEENLTEEMNQLKTSMAERNVLLQICKKEKSMHEPDFSFLKEEAKMPLKELNDLMKINFENDASIRNPDADVTLLIAQYDGMKHSLFKQELEQENLLKEASLIDIIEKKLEDYNPEFKKSSARSKISISTRPQHVFHESARINGDYAIKHVMEGKKKIKDLSSIGTPLIISNIDGNSEILDDGSICCTYEQEKASEVYEEMEGLREQNRIMETELEDLQQRYSEVSLKFAEVEGERQQLVIKVRSLKSSLTIV

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.170
SRP064423	SRR2545915	Juvenile tuber	14.510
SRP108465	SRR5643513	five period of Gastrodia elata	12.230
	SRR5643514	five period of Gastrodia elata	10.770
	SRR5643515	five period of Gastrodia elata	9.580
	SRR5643524	five period of Gastrodia elata	11.960
	SRR5643525	five period of Gastrodia elata	15.220
	SRR5643528	five period of Gastrodia elata	13.370
	SRR5643658	five period of Gastrodia elata	14.900
	SRR5643659	five period of Gastrodia elata	7.310
	SRR5643660	five period of Gastrodia elata	7.360
	SRR5643661	five period of Gastrodia elata	6.430
	SRR5643662	five period of Gastrodia elata	8.020
	SRR5643663	five period of Gastrodia elata	7.760
	SRR5643664	five period of Gastrodia elata	6.470
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.320
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.410
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.530
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.720
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.960
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.700
SRP279888	Gastro	Gastrodia elata tuber	8.49
	Juven	Juvenile tuber	6.38
	Mother_Gastro	Mother tuber of Gastrodia elata	13.74
	Mother_Juven	Mother tuber of Juvenile	10.55