Gene detail

Detail information of GWHGAAEX003386/evm.TU.scaffold_134.30

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743852751\|ref\|XP_010940465.1\|	0	PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Elaeis guineensis]
Swissprot	tr\|Q9ZVT9\|C2GR1_ARATH	4.00E-12	C2 and GRAM domain-containing protein At1g03370
trEMBL	tr\|A0A067JXF4\|A0A067JXF4_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP28646.1}
TAIR	AT3G57880	0	Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000139	816687	828001	+

Transcript Sequence
>GWHTAAEX003386 TCTCTCTCTCTCTCTCTCTCTGTTTCTTCTGCTTGCTCTGCTCTTCTGGTTTGCCTCTTGCTCAGAAGTGATCAAGACAGAGGAGGTGGGTATGTATGAAGATCATAATCAACGATCTGAAGATGGAGGGCGGCAGGTGAACTTCATCATGAATGAGATGAAGCCGACACCATTAAAGGCAACAACAAGCTTCATCTCGGCTTCTTCTTCTTCTCAGCAGCCATTGGAGTTCCAGGTGAAAGAGACGAGACCGCCCCTTCGAGGAAAGAGGGTGGAGAAGCCGGTCAGCACCTACGACCTCGTCGAAGAAGTCGAGTACCTCTTCGTTCGGATCGTCAAAGCCCGGGATTTGCCTGTCAAGGATGTCTCCGGCAGCATTGATCCTTACGTGGAGCTCAGATTTGGGAACAACAGAGCCACAACCAGGCACATGGTGAAGATGCAGAACCCGGAGTGGGACGACGTGTTTGCATTTCCGGTGGAGCGGCTGCAGGCGGTGGTGCTGGAAGCGGTGGTGAGGGACAAGAGCGTGATCAAAGACGACTCAGTGGGAAGAGTGGTGTTTGATCTGACGGAGGTGCCTCAGAGGGCGCCTCCGGACAGCCCGCTGGCACCGGAGTGGTACTTTCTAATGGACAGCAAGGGGGAGAGGGCCAAGGAAGGGGAGCTGATGGCGGCTGTGTGGTTCGGAACCCAAGCCGACGAGTGCTTCCCCATCGCCCTCCACTCTGGCTCGACCGGCCTGTCCTTCAACTCCCTGATCCGGTCCAAGGTGTACCACTCGCCCAGGCTGTGGTACCTCCGTGCCAACGTTATTGAAGCCCAGGACGTGGTCATCCCCGATAAGACAAGATTCCCGGACCTCTTCGTCAAGTGCCAGCTCGGAGCGCAGATCCTGCGGACCAAAACCGTTCAAGTCAGGGCGACGGCCAATCCTCACCCTCTGTGGAACGAAGACCTGGTGTTCGTCGCCGCCGAGCCGTTCGAGGAGGCCCTCATCCTCTCCTTGCATGATCACGTGGGGCCGAATAAAGACGAGACCGTCGGCAGAGTTCAGATCCAGCTCTCGGGAGTCGAGAAGCGGCTGGAAGGGAAACCCGTGGACTCGAAATGGTACAGCCTTGAGAAGCACGGGGTGAACCAAGGAGGGGAGAAGGAGAGAAGGGATAGGTTTTTCAGCAGACTGCATCTCAGGCTGTCTCTCGACGGCGGTTACCACGTGCTTGATGATTCCACGCACTGCAGCAGTGATCTCAGGCCGGCGGCCAGGCAACTCTGGAAGCCCCACATCGGGCTGCTGGAGCTCGGAATACTCAGGGCGGAGGGCCTCCAGGCGATGAAGAAGGGAACCTGCGACTCCTACTGCGTCGCAAAGTACGGCCAAAAATGGGTGCGCACCCGAACCGTTATGAACAGCCTCAGCCCCAAATATAACGAGCAGTACACGTGGGAGGTTTATGATCACGCCACAGTCCTCCTCGTCGCCGTCTTTGACAACTCCCAGCTCGACAAAAAGGGGGCGGAGGAGGGAAGCAGCAAGGATGCGAGGATGGGGAAGGTGAGAATCCGGGTGTCGAGTCTGGAGAGCGGGAGGGTGTACACACATTGGTACCCACTCCTGGTGCTACAGAGCTCGGGGATAAAGAAAATGGGGGAGCTGCATCTGGCCATCCGCTTCTCCTCGACGTCTCTGTTCCAGACGATGATGATGTACTCGAAACCGCTACTTCCGAAGCTTCACTACACCAGGCCGCTGTCGATGATGCAGCTGGAGATTCTCCGGCGGCACACGGTGGCGATCGTGGCGGAGCGACTGGGCAGGATGGAGCCGCCGCTGAGGAGGGAAGTGGTGGAGTATCTATCCGACGTAGACTCGCACCTGTGGAGCATGAGGAGAAGCAAGGCCAATTTCTACCGCCTCATGTCCCTCTTCTCCGGCCCCCTCGCCGTCGGGAAATGGTTGGGCGATGTCTGCCTCTGGAAAAACCCGGTGACGACCGTGCTGGTGCACATCCTCTTCGTCATGCTCGTCTGCTTCCCGGAGCTCATCGTCCCCACCGCCTTCCTCTACGCCTTCCTCATCGGCGTGTGGAACTACAGGCGCAGGCCGCGCAATCCACCGCACCTGAACACCAGGGCCTCGCAAGCCGACTCCGCCAACCCGGACGAGCTGGACGAGGAATTCGACGCCTTTCCTTCAACGAAGAATCAGGACGTGCTGAGGATGAGGTACGACCGGCTAAGGACCGTCGCCGGGAGGATGCAGGCCGTCGCAGGGGATACCGCAATGCAGGGGGAGAGGCTGCAGCTGCTGCTCAGCTGGAGGGATCCCCGGGCCACCGCTATCTTCCTCGCTTTCTGCCTTCTCGCCGCCTTCGTCCTCTATATCACCCCTTTCTCCCTCCTCGCCGTCCTCTGCGGCTTTTATCTCATGAGGCATCCTAAGTTCAGGCACAAGATGCCCCCTCCGCCCCTCAATTTCTTCAGGAGGCTGCCTGCCAGATCCGACTCCATGCTCTAACTCTCAATCTTCCGTGTTCTTGTCACTGTTTCGCTGTGTACTTTATTCAACGTATCTTCTTGCTCACTAGACCTCATATTTTGAGTAATTAGAATTTACAAGTTCTTTTTTTAGTTTTCTTTAGAACATGATCATCTTAGATGTTGATCTTCATGTCTGTTTAAGTTTGTAAACTTTAAGTGGTCTTACTCAAGCTTAGATTTTGAATAATTGGAATTTACAAGTTCTTCTGTGCTTTGATTTGTGTTCGTTGTGGTTGCTTTCTCATTTATATATGCTTTAATT

Network for GWHGAAEX003386

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00168.29	C2	76	168	4.90E-18
PF00168.29	C2	235	344	9.30E-16
PF00168.29	C2	402	509	1.10E-24
PF08372.9	PRT_C	654	809	8.40E-73

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.170
SRP064423	SRR2545915	Juvenile tuber	9.170
SRP108465	SRR5643513	five period of Gastrodia elata	49.940
	SRR5643514	five period of Gastrodia elata	65.540
	SRR5643515	five period of Gastrodia elata	48.170
	SRR5643524	five period of Gastrodia elata	56.040
	SRR5643525	five period of Gastrodia elata	7.250
	SRR5643528	five period of Gastrodia elata	5.520
	SRR5643658	five period of Gastrodia elata	7.300
	SRR5643659	five period of Gastrodia elata	6.930
	SRR5643660	five period of Gastrodia elata	6.370
	SRR5643661	five period of Gastrodia elata	8.000
	SRR5643662	five period of Gastrodia elata	5.820
	SRR5643663	five period of Gastrodia elata	5.660
	SRR5643664	five period of Gastrodia elata	6.630
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	55.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	63.880
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	48.510
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	33.320
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	51.190
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	55.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	36.810
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	30.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	64.050
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	83.970
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	92.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	92.050
SRP279888	Gastro	Gastrodia elata tuber	3.31
	Juven	Juvenile tuber	4.59
	Mother_Gastro	Mother tuber of Gastrodia elata	15.92
	Mother_Juven	Mother tuber of Juvenile	10.58