Detail information of GWHGAAEX003389/evm.TU.scaffold_134.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|261854910|ref|YP_003262193.1|6.00E-09ATP-dependent helicase HrpA [Halothiobacillus neapolitanus c2]
KOGKOG09263.00E-32DEAH-box RNA helicase
nrgi|743784169|ref|XP_010921592.1|3.96E-67PREDICTED: probable ATP-dependent RNA helicase DHX37 [Elaeis guineensis]
Swissprottr|O22899|DHX15_ARATH8.00E-15Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
trEMBLtr|M0UEQ4|M0UEQ4_HORVD1.00E-52Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_10268.4}
TAIRAT1G333903.00E-32RNA helicase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000139869652880123-
Transcript Sequence

Network for GWHGAAEX003389

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms55.790
SRR2545915Juvenile tuber64.850
SRP108465SRR5643513five period of Gastrodia elata30.320
SRR5643514five period of Gastrodia elata32.450
SRR5643515five period of Gastrodia elata28.880
SRR5643524five period of Gastrodia elata28.140
SRR5643525five period of Gastrodia elata33.760
SRR5643528five period of Gastrodia elata23.890
SRR5643658five period of Gastrodia elata33.390
SRR5643659five period of Gastrodia elata37.520
SRR5643660five period of Gastrodia elata35.710
SRR5643661five period of Gastrodia elata28.810
SRR5643662five period of Gastrodia elata37.670
SRR5643663five period of Gastrodia elata42.780
SRR5643664five period of Gastrodia elata43.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.230
SRR6049655Rhizomagastrodiae_C368-T10_good_147.490
SRR6049656Rhizomagastrodiae_C368-T07_good_134.050
SRR6049657Rhizomagastrodiae_C368-T07_good_143.180
SRR6049658Rhizomagastrodiae_C368-T04_good_135.700
SRR6049659Rhizomagastrodiae_C368-T04_good_135.400
SRR6049660Rhizomagastrodiae_C368-T01_good_136.350
SRR6049661Rhizomagastrodiae_C368-T04_good_137.190
SRR6049662Rhizomagastrodiae_C368-T01_good_126.920
SRR6049663Rhizomagastrodiae_C368-T01_good_128.830
SRR6049664Rhizomagastrodiae_C368-T10_good_126.640
SRR6049665Rhizomagastrodiae_C368-T10_good_126.640
SRP279888GastroGastrodia elata tuber 46.01
JuvenJuvenile tuber60.47
Mother_GastroMother tuber of Gastrodia elata 19.56
Mother_JuvenMother tuber of Juvenile 37.79