Detail information of GWHGAAEX003396/evm.TU.scaffold_134.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG11023.00E-176Rab6 GTPase activator GAPCenA and related TBC domain proteins
nrgi|672202129|ref|XP_008778308.1|0PREDICTED: EVI5-like protein isoform X1 [Phoenix dactylifera]
trEMBLtr|B9SIY8|B9SIY8_RICCO0Ecotropic viral integration site, putative {ECO:0000313|EMBL:EEF36381.1}
TAIRAT5G159303.00E-176plant adhesion molecule 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013911831321201391+
Transcript Sequence

Network for GWHGAAEX003396

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00566.17RabGAP-TBC302379.70E-57
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.160
SRR2545915Juvenile tuber12.020
SRP108465SRR5643513five period of Gastrodia elata11.680
SRR5643514five period of Gastrodia elata8.450
SRR5643515five period of Gastrodia elata8.780
SRR5643524five period of Gastrodia elata8.440
SRR5643525five period of Gastrodia elata12.970
SRR5643528five period of Gastrodia elata11.300
SRR5643658five period of Gastrodia elata14.210
SRR5643659five period of Gastrodia elata7.760
SRR5643660five period of Gastrodia elata10.490
SRR5643661five period of Gastrodia elata9.270
SRR5643662five period of Gastrodia elata10.260
SRR5643663five period of Gastrodia elata8.580
SRR5643664five period of Gastrodia elata7.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.190
SRR6049655Rhizomagastrodiae_C368-T10_good_15.410
SRR6049656Rhizomagastrodiae_C368-T07_good_111.110
SRR6049657Rhizomagastrodiae_C368-T07_good_114.520
SRR6049658Rhizomagastrodiae_C368-T04_good_120.210
SRR6049659Rhizomagastrodiae_C368-T04_good_119.410
SRR6049660Rhizomagastrodiae_C368-T01_good_118.510
SRR6049661Rhizomagastrodiae_C368-T04_good_113.950
SRR6049662Rhizomagastrodiae_C368-T01_good_114.270
SRR6049663Rhizomagastrodiae_C368-T01_good_115.470
SRR6049664Rhizomagastrodiae_C368-T10_good_112.090
SRR6049665Rhizomagastrodiae_C368-T10_good_112.090
SRP279888GastroGastrodia elata tuber 9.25
JuvenJuvenile tuber8.28
Mother_GastroMother tuber of Gastrodia elata 6.21
Mother_JuvenMother tuber of Juvenile 3.64