Detail information of GWHGAAEX003401/evm.TU.scaffold_134.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24420Uncharacterized conserved protein, contains PA domain
nrgi|695018411|ref|XP_009396168.1|0PREDICTED: signal peptide peptidase-like 4 [Musa acuminata subsp. malaccensis]
Swissprottr|Q5Z413|SIPL5_ORYSJ0Signal peptide peptidase-like 5 (Precursor)
trEMBLtr|M0SN65|M0SN65_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P12000_001}
TAIRAT1G636900SIGNAL PEPTIDE PEPTIDASE-LIKE 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013914399721485261+
Transcript Sequence

Network for GWHGAAEX003401

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02225.21PA911682.40E-09
PF04258.12Peptidase_A22B2465211.40E-84
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004190Molecular Functionaspartic-type endopeptidase activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.040
SRR2545915Juvenile tuber29.140
SRP108465SRR5643513five period of Gastrodia elata30.340
SRR5643514five period of Gastrodia elata37.770
SRR5643515five period of Gastrodia elata34.010
SRR5643524five period of Gastrodia elata37.970
SRR5643525five period of Gastrodia elata40.110
SRR5643528five period of Gastrodia elata38.850
SRR5643658five period of Gastrodia elata41.360
SRR5643659five period of Gastrodia elata29.390
SRR5643660five period of Gastrodia elata31.820
SRR5643661five period of Gastrodia elata29.780
SRR5643662five period of Gastrodia elata35.090
SRR5643663five period of Gastrodia elata34.180
SRR5643664five period of Gastrodia elata33.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.470
SRR6049655Rhizomagastrodiae_C368-T10_good_130.940
SRR6049656Rhizomagastrodiae_C368-T07_good_132.420
SRR6049657Rhizomagastrodiae_C368-T07_good_130.050
SRR6049658Rhizomagastrodiae_C368-T04_good_131.360
SRR6049659Rhizomagastrodiae_C368-T04_good_133.330
SRR6049660Rhizomagastrodiae_C368-T01_good_137.490
SRR6049661Rhizomagastrodiae_C368-T04_good_135.120
SRR6049662Rhizomagastrodiae_C368-T01_good_136.960
SRR6049663Rhizomagastrodiae_C368-T01_good_139.720
SRR6049664Rhizomagastrodiae_C368-T10_good_136.700
SRR6049665Rhizomagastrodiae_C368-T10_good_136.700
SRP279888GastroGastrodia elata tuber 39.84
JuvenJuvenile tuber40.01
Mother_GastroMother tuber of Gastrodia elata 42.55
Mother_JuvenMother tuber of Juvenile 35.67