Detail information of GWHGAAEX003402/evm.TU.scaffold_134.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|292493073|ref|YP_003528512.1|2.00E-30Appr-1-p processing domain-containing protein [Nitrosococcus halophilus Nc 4]
KOGKOG26330Hismacro and SEC14 domain-containing proteins
nrgi|743780216|ref|XP_010920456.1|0PREDICTED: protein GDAP2 homolog [Elaeis guineensis]
trEMBLtr|M0TRP7|M0TRP7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P18940_001}
TAIRAT1G693400appr-1-p processing enzyme family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013914870301515283-
Transcript Sequence

Network for GWHGAAEX003402

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01661.20Macro972091.50E-24
PF13716.5CRAL_TRIO_24115436.40E-32
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.310
SRR2545915Juvenile tuber10.930
SRP108465SRR5643513five period of Gastrodia elata14.140
SRR5643514five period of Gastrodia elata18.750
SRR5643515five period of Gastrodia elata15.460
SRR5643524five period of Gastrodia elata14.700
SRR5643525five period of Gastrodia elata10.960
SRR5643528five period of Gastrodia elata7.210
SRR5643658five period of Gastrodia elata8.010
SRR5643659five period of Gastrodia elata15.640
SRR5643660five period of Gastrodia elata15.690
SRR5643661five period of Gastrodia elata13.200
SRR5643662five period of Gastrodia elata12.600
SRR5643663five period of Gastrodia elata19.120
SRR5643664five period of Gastrodia elata15.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.490
SRR6049655Rhizomagastrodiae_C368-T10_good_114.780
SRR6049656Rhizomagastrodiae_C368-T07_good_116.270
SRR6049657Rhizomagastrodiae_C368-T07_good_119.390
SRR6049658Rhizomagastrodiae_C368-T04_good_110.980
SRR6049659Rhizomagastrodiae_C368-T04_good_110.880
SRR6049660Rhizomagastrodiae_C368-T01_good_115.320
SRR6049661Rhizomagastrodiae_C368-T04_good_112.560
SRR6049662Rhizomagastrodiae_C368-T01_good_113.850
SRR6049663Rhizomagastrodiae_C368-T01_good_19.360
SRR6049664Rhizomagastrodiae_C368-T10_good_116.570
SRR6049665Rhizomagastrodiae_C368-T10_good_116.570
SRP279888GastroGastrodia elata tuber 10.81
JuvenJuvenile tuber14.76
Mother_GastroMother tuber of Gastrodia elata 11.36
Mother_JuvenMother tuber of Juvenile 9.83