Detail information of GWHGAAEX003406/evm.TU.scaffold_134.54
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15806543|ref|NP_295256.1| | 2.00E-27 | hypothetical protein DR_1533 [Deinococcus radiodurans R1] |
| nr | gi|672178995|ref|XP_008809654.1| | 0 | PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Phoenix dactylifera] |
| Swissprot | tr|O22781|SUVH2_ARATH | 0 | Histone-lysine N-methyltransferase family member SUVH2 |
| trEMBL | tr|A2YKQ8|A2YKQ8_ORYSI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:EAZ03669.1} |
| TAIR | AT2G33290_1 | 4.00E-104 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000139 | 1657030 | 1659108 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003406
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02182.16 | SAD_SRA | 189 | 342 | 2.00E-46 |
| PF05033.15 | Pre-SET | 373 | 468 | 3.70E-21 |
| PF00856.27 | SET | 487 | 620 | 7.30E-13 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SET |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K11420 | EHMT | Metabolic pathways | map01100 |
| Lysine degradation | map00310 | ||
| Longevity regulating pathway | map04211 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016571 | Biological Process | histone methylation |
| GO:0034968 | Biological Process | histone lysine methylation |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0018024 | Molecular Function | histone-lysine N-methyltransferase activity |
| GO:0005634 | Cellular Component | nucleus |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.940 |
| SRR2545915 | Juvenile tuber | 1.280 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.810 |
| SRR5643514 | five period of Gastrodia elata | 7.150 | |
| SRR5643515 | five period of Gastrodia elata | 5.490 | |
| SRR5643524 | five period of Gastrodia elata | 7.300 | |
| SRR5643525 | five period of Gastrodia elata | 5.670 | |
| SRR5643528 | five period of Gastrodia elata | 3.120 | |
| SRR5643658 | five period of Gastrodia elata | 7.300 | |
| SRR5643659 | five period of Gastrodia elata | 2.040 | |
| SRR5643660 | five period of Gastrodia elata | 2.620 | |
| SRR5643661 | five period of Gastrodia elata | 2.640 | |
| SRR5643662 | five period of Gastrodia elata | 2.850 | |
| SRR5643663 | five period of Gastrodia elata | 2.570 | |
| SRR5643664 | five period of Gastrodia elata | 2.280 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.220 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.290 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.530 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.130 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.750 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.820 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.860 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.580 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.680 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.680 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.29 |
| Juven | Juvenile tuber | 10.55 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.51 | |
| Mother_Juven | Mother tuber of Juvenile | 11.43 |