Detail information of GWHGAAEX003413/evm.TU.scaffold_134.61
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|82703721|ref|YP_413287.1| | 5.00E-11 | MT-A70 [Nitrosospira multiformis ATCC 25196] |
| KOG | KOG2097 | 0 | Predicted N6-adenine methylase involved in transcription regulation |
| nr | gi|695026290|ref|XP_009400435.1| | 0 | PREDICTED: methyltransferase-like protein 1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q94AI4|METL1_ARATH | 3.00E-153 | Methyltransferase-like protein 1 |
| trEMBL | tr|B9IDB4|B9IDB4_POPTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:EEF06614.2} |
| TAIR | AT4G09980 | 0 | Methyltransferase MT-A70 family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000139 | 1745815 | 1761814 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003413
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05063.13 | MT-A70 | 858 | 1035 | 1.60E-52 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0032259 | Biological Process | methylation |
| GO:0003676 | Molecular Function | nucleic acid binding |
| GO:0008168 | Molecular Function | methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 60.630 |
| SRR2545915 | Juvenile tuber | 55.460 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 39.740 |
| SRR5643514 | five period of Gastrodia elata | 36.230 | |
| SRR5643515 | five period of Gastrodia elata | 35.420 | |
| SRR5643524 | five period of Gastrodia elata | 36.910 | |
| SRR5643525 | five period of Gastrodia elata | 36.150 | |
| SRR5643528 | five period of Gastrodia elata | 35.380 | |
| SRR5643658 | five period of Gastrodia elata | 36.240 | |
| SRR5643659 | five period of Gastrodia elata | 31.230 | |
| SRR5643660 | five period of Gastrodia elata | 36.040 | |
| SRR5643661 | five period of Gastrodia elata | 30.640 | |
| SRR5643662 | five period of Gastrodia elata | 37.390 | |
| SRR5643663 | five period of Gastrodia elata | 35.570 | |
| SRR5643664 | five period of Gastrodia elata | 35.750 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 44.250 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 34.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 41.560 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 48.840 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 46.890 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 58.810 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 48.810 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 47.300 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 39.090 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 44.400 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 39.680 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 39.680 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 40.74 |
| Juven | Juvenile tuber | 60.13 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 45.23 | |
| Mother_Juven | Mother tuber of Juvenile | 62.54 |