Gene detail

Detail information of GWHGAAEX003416/evm.TU.scaffold_134.65

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000139	1938125	1947064	-

Transcript Sequence
>GWHTAAEX003416 ATTTTTTTGTGGTCAGCCCGCGCGCAGGATTTCGGCCAATGCTCGTGGTGAAGGTGGATTTTAAGAATGAAGAAGGTTTCCTCTGATGTTCCGCAATTTGCATACTCGGAAACTTCCATGAAACGATCCACAAGAAGTTTAAATCTCAAATCCAAATCCAGGTCTAGGGTTTCTTCCGGTCCTCCCGATGCAAATGTGCAAAAACGGGTGAAGTTTTCAAATTTTACTGACATTTGTGAACCAGAGCTAACTCAGAGTTGCCAATTGCCTCAAACTGAAGTTGATGGTGCAAAAACCTCCGAGTACAAATCATTCAAGAAACTATTGGAAAAAACTTTAGATTCAGGCAATGCCATCCCAAGTAAATTTGAGGTTAAAAGGCCGCCATTGCCTCTACAAAATGTTTCATCTATAGTGCAAGGATTTTTGTCATCACCTATTCAGATTTCTCAGAAGCATGAATTTGAAAACAAAGCTAAAGTCAGTAATTATCCTGCCAGATTGATGCCACTTTCAAAGATCACACCCATTGATCGACTGCTTTATCCTTCTCCTCAAATACTTGGGAAAAATTGCGGCAGTGTATATTCAGAACCCGTGCCCGAGCCAAAAGGAACCTTTGACGGAAAGAGGGCATGCCTACTTGATATAGCTGCTAGAACTTTTTCACGAAATGTTAATGATTTATTGTCTAGCAGGTCAGATTTCATTCACGAGATTCTTCAGAGACTTGGAATCAGAAGAAATAAAAGCAAAGATGGCAAACTCCAAAAAACTGAAGAAAATATGAGTGCTCTTCAATTTCCTGAATCATCCAACAAGAGAAATAGCCACATTAATGAATTGTGTGATGATTTACATGAGAATACATGTGCCCATAGGACTGGGAAAGCTCGAAATCATAAAATTCACACTTTTCCATTCAGTCATTCCCTTGAAACTAGTTTCAAATGCAAGTGGCAGATGTTGGAATTATTTAACGAGAAAGGTGCTGTAGTTTTGCCAGATTTTGGCATTCTGGCTTCAAACATTGATAGAACCCAAACCTCGCTCGACTCACCCAGTGATATTTCTGATGCCAATCTGTCTCCAACTGATTGCGATGCTTGTTATATGGGGCCACTTGATGAAAACCTGCATTGCACTCCAGTTTTTAATCACAAAGGACCATTTGATTGTGCTGCCAGTTTATGGAATTCAAAAGCAGAACTGGATTGTAACAGTCATAGAGGGAATCATGACTCGTTTCAGGCAGATTTTGTCATCACCAACAGTTGCAATTCTTATGAATTCTTCCAGGAACAGGCACTTGTCCCATACAAGAATGACCTTTTAACAGGATTTTGCATCCAGAGTCCAGGCACGCATCTGCATCTAGCTGAAGAACAGTTTAGTGTGCCTTTATTGGAGTGGGATGCCAATCCAGAGCAAAAAATTCTTCCTGCTCCTAAATGTCTTTCCCCTAAAGAGGTGGATCATTTTACTCCACCATATGGTCCTTTAGATATTCTCAATAAAACCAAAAGCTCAGGTTTATTTGATTTCTACGGAATGAGAAGTTTCAGCTTCATACATCATAGATACAATTTTGATTCCATTTTTCAAAATGATCCAGCTTCAAGTTCAATGCCTAGTCCTTTGTTGAGCATTCAGAATTATTATGATAATGGTGATCATTCTTCAGTATATTCCGACTATCAAGGGTGGATATAGAGTGGGGCACTAGAAATAGTGCATTTACTAGCTTTGGCCTGTTCAATGAGCTGCTTGATCAGGTATTGATTGCCGACTAATATTGCTCAGTGGATACGGAGATCTGAACGTTTGTTCTCAACAATTGGTCAAGTCTTTTTTGGGCAAAGAGGATCTTTTTGGATCTTTGGCCACATGTTGAAGCTGGCATTCAAGTATTTTAGATATCATTAATCATCTTTCTTAATATAATTAAGTAGTGAATCCTATGCTAAACCTAGTGTAAAGGATCTATCCTTTGATCACTTGAGTTTTTTATCAAGTGTTCAAAATTATAATTGGAAATTATGCCCCCAATGGTATTGAAAATATAAATTTAAAGCATAAAAAAGCTAAATTTTTTGATAAAATTCCTTCTAT

Network for GWHGAAEX003416

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.160
SRP064423	SRR2545915	Juvenile tuber	6.370
SRP108465	SRR5643513	five period of Gastrodia elata	3.710
	SRR5643514	five period of Gastrodia elata	2.790
	SRR5643515	five period of Gastrodia elata	3.010
	SRR5643524	five period of Gastrodia elata	3.660
	SRR5643525	five period of Gastrodia elata	4.580
	SRR5643528	five period of Gastrodia elata	5.310
	SRR5643658	five period of Gastrodia elata	3.770
	SRR5643659	five period of Gastrodia elata	4.980
	SRR5643660	five period of Gastrodia elata	5.310
	SRR5643661	five period of Gastrodia elata	4.710
	SRR5643662	five period of Gastrodia elata	5.000
	SRR5643663	five period of Gastrodia elata	5.130
	SRR5643664	five period of Gastrodia elata	3.830
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.740
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.460
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.840
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.820
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.630
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.030
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.830
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.610
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.610
SRP279888	Gastro	Gastrodia elata tuber	6.10
	Juven	Juvenile tuber	4.15
	Mother_Gastro	Mother tuber of Gastrodia elata	8.20
	Mother_Juven	Mother tuber of Juvenile	7.79