Detail information of GWHGAAEX003417/evm.TU.scaffold_134.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30674.00E-100Translin family protein
nrgi|747093652|ref|XP_011094641.1|5.15E-121PREDICTED: translin-like [Sesamum indicum]
trEMBLtr|W1NI42|W1NI42_AMBTC1.00E-118Uncharacterized protein {ECO:0000313|EMBL:ERM94850.1}
TAIRAT2G370204.00E-100Translin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013919869152014467-
Transcript Sequence

Network for GWHGAAEX003417

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01997.15Translin1153061.80E-43
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016070Biological ProcessRNA metabolic process
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003697Molecular Functionsingle-stranded DNA binding
GO:0003723Molecular FunctionRNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.220
SRR2545915Juvenile tuber35.240
SRP108465SRR5643513five period of Gastrodia elata44.450
SRR5643514five period of Gastrodia elata52.850
SRR5643515five period of Gastrodia elata41.620
SRR5643524five period of Gastrodia elata47.000
SRR5643525five period of Gastrodia elata51.470
SRR5643528five period of Gastrodia elata58.940
SRR5643658five period of Gastrodia elata46.270
SRR5643659five period of Gastrodia elata62.310
SRR5643660five period of Gastrodia elata66.070
SRR5643661five period of Gastrodia elata68.740
SRR5643662five period of Gastrodia elata72.760
SRR5643663five period of Gastrodia elata62.400
SRR5643664five period of Gastrodia elata74.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.320
SRR6049655Rhizomagastrodiae_C368-T10_good_130.570
SRR6049656Rhizomagastrodiae_C368-T07_good_142.180
SRR6049657Rhizomagastrodiae_C368-T07_good_144.200
SRR6049658Rhizomagastrodiae_C368-T04_good_129.990
SRR6049659Rhizomagastrodiae_C368-T04_good_123.110
SRR6049660Rhizomagastrodiae_C368-T01_good_133.420
SRR6049661Rhizomagastrodiae_C368-T04_good_130.230
SRR6049662Rhizomagastrodiae_C368-T01_good_150.140
SRR6049663Rhizomagastrodiae_C368-T01_good_140.940
SRR6049664Rhizomagastrodiae_C368-T10_good_152.730
SRR6049665Rhizomagastrodiae_C368-T10_good_152.730
SRP279888GastroGastrodia elata tuber 53.84
JuvenJuvenile tuber60.29
Mother_GastroMother tuber of Gastrodia elata 37.02
Mother_JuvenMother tuber of Juvenile 54.28