Detail information of GWHGAAEX003419/evm.TU.scaffold_134.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268315792|ref|YP_003289511.1|5.00E-92nicotinate-nucleotide pyrophosphorylase [Rhodothermus marinus DSM 4252]
KOGKOG30085.00E-155Quinolinate phosphoribosyl transferase
nrgi|672112249|ref|XP_008804761.1|0PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic [Phoenix dactylifera]
Swissprottr|Q0IZS0|NADC_ORYSJ1.00E-172Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic (Precursor)
trEMBLtr|B9SJ41|B9SJ41_RICCO0Nicotinate-nucleotide pyrophosphorylase [carboxylating], putative {ECO:0000313|EMBL:EEF36350.1}
TAIRAT2G013505.00E-155quinolinate phoshoribosyltransferase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013920912542110562-
Transcript Sequence

Network for GWHGAAEX003419

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02749.15QRPTase_N821701.60E-25
PF01729.18QRPTase_C1723541.40E-56
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00767nadC, QPRT Metabolic pathways map01100
Nicotinate and nicotinamide metabolismmap00760

Gene Ontology

GO term OntologyName
GO:0009435Biological ProcessNAD biosynthetic process
GO:0016763Molecular Functiontransferase activity, transferring pentosyl groups
GO:0003824Molecular Functioncatalytic activity
GO:0004514Molecular Functionnicotinate-nucleotide diphosphorylase (carboxylating) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.120
SRR2545915Juvenile tuber13.730
SRP108465SRR5643513five period of Gastrodia elata8.000
SRR5643514five period of Gastrodia elata10.500
SRR5643515five period of Gastrodia elata9.890
SRR5643524five period of Gastrodia elata11.140
SRR5643525five period of Gastrodia elata10.000
SRR5643528five period of Gastrodia elata16.760
SRR5643658five period of Gastrodia elata9.580
SRR5643659five period of Gastrodia elata4.770
SRR5643660five period of Gastrodia elata5.890
SRR5643661five period of Gastrodia elata6.140
SRR5643662five period of Gastrodia elata6.970
SRR5643663five period of Gastrodia elata6.630
SRR5643664five period of Gastrodia elata4.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.080
SRR6049655Rhizomagastrodiae_C368-T10_good_16.390
SRR6049656Rhizomagastrodiae_C368-T07_good_117.110
SRR6049657Rhizomagastrodiae_C368-T07_good_111.630
SRR6049658Rhizomagastrodiae_C368-T04_good_120.230
SRR6049659Rhizomagastrodiae_C368-T04_good_117.050
SRR6049660Rhizomagastrodiae_C368-T01_good_116.160
SRR6049661Rhizomagastrodiae_C368-T04_good_119.680
SRR6049662Rhizomagastrodiae_C368-T01_good_126.350
SRR6049663Rhizomagastrodiae_C368-T01_good_122.130
SRR6049664Rhizomagastrodiae_C368-T10_good_114.510
SRR6049665Rhizomagastrodiae_C368-T10_good_114.510
SRP279888GastroGastrodia elata tuber 28.99
JuvenJuvenile tuber4.11
Mother_GastroMother tuber of Gastrodia elata 18.83
Mother_JuvenMother tuber of Juvenile 3.32