Gene detail

Detail information of GWHGAAEX003436/evm.TU.scaffold_134.94

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672115821\|ref\|XP_008781060.1\|	0	PREDICTED: DNA (cytosine-5)-methyltransferase DRM2 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q9M548\|DRM2_ARATH	2.00E-84	DNA (cytosine-5)-methyltransferase DRM2
trEMBL	tr\|I1PS78\|I1PS78_ORYGL	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:ORGLA05G0022600.1}
TAIR	AT3G17310	6.00E-111	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000139	2691030	2778345	-

Transcript Sequence
>GWHTAAEX003436 AGGTTTTATTGAACCATTTAAGCTGTTTTGCTGATCAACATGGTTAAGCTAGAAGATTCCATGGGTTGTGACAGTTCTTCAAATGGTGAGGCTGGGGGGTTTAATTCTTCTACATGCGTTGGTTCCTCCGTGTTGAATCCATGCTTCATGCCTGTTGGGGTAAAGGAGGAAAGTCTTCCTAGCTCATCCAGCAGTCGCTATAAATCTTATCTTGTTGGAATGGGGTTTTCACCAATACTTGTCGACAAAGTGATCGAGCAAAAGGGAGAGGAGGATGTCAATGTTCTAGTGGAAGCCCTTCTTACTCAATCTGTTTATTTGAAATCAAGTTCTGCTTCAGCATCTTTATCTGCATATCCTATTATTTTAAAAGAAGAAGAAAGTTCACCTTTCGTGTTTACTCCAGATGATAATCAGGATAAGAGTGGCAATACAATATCATGTGCGGATATGGAGAAGAGATCTTATTTATTGATGATGGATTTTTCAGACGAAGAGATTGATTCAGCCATAGCTCGCCTTGGTGAAAATTCATCTTTAGGGGAGCTTGTTGACTTCATTATTGCTGCTCAAAAGGCACAGTTCTGTGGAGATGATGAAATGCTGGGATCAGTTGCCGGCTGCATTGAAAATGAAGCTTGCACTGCCGAAGCTCTCTTTGGAACAATGGATAAAACGCTCTGCTTATTTCGAATGGGCTTCACTGAAAATGAAGTATCTTCAGCAATTGCTAAATTTGGCTCAGATGCACCTCTCAATAAGCTTGCTGATTCAATTTTCGCTAGTCGTCTTGCATATCAAGTTAAAGAAGAGGATTTTTCAAATGATGACATCTTTTTCTCACCACAAGAGGAGAGTGAGTTTGAGCAGTTTGTCTGTGCAAAGGGAGACTATCCAGAAGAATCTTTTCCTCCAGCTGAAACTTGGCTAAAAAGCTCGTCTCATTTAAATTACTCCTTTATTGAAAATGATGACAATAGAACCCTGAAAAAAGCCAAGTTTGTACGTGAAAATGATGCTGATACTTTTTGCCAGAAAACGCAATGGAAAAATGCCGGGCAATTTAAATGCCCATCAACTCAACCAGGAGTGAATACTGAATGCCCTGATATTTATGGCTCAATAGATGCAGGGTTTCTAAAACAAGAATTTTCTGATTATAAACAACGCAACCTCAATCAGAATATGGAGTTCAAATCACCTTACTTTTTTTATGGAAATGTTGCTGATGTTTCGCATGATACATGGAAAAAACTTTCTCAGTTTCTTCATGGAACCCAACCAGAATTTGTGAATTGTCAGTTTTTTTCAGCCTTCATCCGCAAGGAAGGCTATCTTCACAATCTTCCTACAGCTGAAAGGTTTCATATTTTTCCCAAGTCACCAATGACAATTGAAGATGCTTTGCCAAGCTCTAAGAAATGGTGGCCGTCATGGGACACACGGAAGCAATTTAGTTGCATAAATACGGACACCATTGGAGTTGCTCAGCTTTGTGATCGTCTTGGAAGGATGATGGGGACTTCACAAGGATTGATTTCAAAAGAACAACAAATGGATATCCTTCACCACTGCAAGGCATTGAATTTGGTTTGGATTGGCCCCAGCAAATTATGCCCTATAGAGCCTGAGCATTTGGAGCAAATTTTAGGATACCCTAGGCATCATACAGATGTATGGGGTTTGGAGCTGCCTGGTAGGTTAAGTGCACTAAAATACTCCTTTCAGACTGATACGATCGGTTATCACTTGTCAGTCTTAAAGAGCATTTATCCTGATGGTTTGAGGTTGCTCTCTATTTGTAGTGGGGTTGGTGGAGCAGAAATTGCATTGTACAGGCTTGGCATTCGGCTTAAATGTGTTGTGTCTGTGGAAGCATCTGAGAGCTACAGGAAAATCTTAAAACAATGGTGGAACAACACTGGACAATCTGGAGAGCTTAGACAGATTGCTGGCGTTGAAAAGTTGACAATTCGGCTGATTGAGGGTTTGATTAAAGATTTTGGTGGTTTTGACATTATCATAGGCGGCAATCCTGGCTACTTTGCATCTTCAGGTTCTAGTAAAGACAGTTTAGTGGGAATGGATCTGAATCATTTCTATGAATTTACCCGTGTGCTTCATCGAGTGAGAAGTGTAATGGGAAGAAACCCTGCATCAGCAGGAAGAAGGGCTTGAATTTAAATATTTCTTGATGTTTCACACATCCATTGAGATTAAGATACTATGGATGGTGCAGATTTCAAAACTTGTGGCATCCTCATTTACTATGGTCTATCATTTAGCATCTTGCGTTGCCATCTTAAATCAGTGCAGGAAAATGTAGTTATCTATTTATTTAATTAATATTGCTTGGCAGCTATTCTTCCTTTCCCGCTTTTGGATTTAAACCGTCTTTATTTTTGTAATTACTATAATGAATTGTGAAAATTGTGGTATTGCTATTGTGGCTACACAAAGCCTTTAGACAGCACTTCCAGAATGGTGGGGCTGATTGTTGAGAAGGCTGGACTGCCGATCAAATTAATGGTGCAAAGATCTGTAGGGCATATTCCTCAAAACTGCTTAGTCATCAAAATTTGATGTATCAAATACCCTCTATACTGTTTGTAACGAACATCTTGAACTTGCATGACATTGTCTCTCAATTGTTCCTTTGCAATTCTGCTTTCTTTTATGATATAAGCAAATATTGTCTTTCGATTAAAGTATTTGTTCTCTTAATCGTTGTTAATCAATTGTTGTATTAGCTATGTTAATTTTCATCCAAGG

Network for GWHGAAEX003436

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006306	Biological Process	DNA methylation

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.280
SRP064423	SRR2545915	Juvenile tuber	13.190
SRP108465	SRR5643513	five period of Gastrodia elata	9.800
	SRR5643514	five period of Gastrodia elata	13.060
	SRR5643515	five period of Gastrodia elata	10.760
	SRR5643524	five period of Gastrodia elata	11.560
	SRR5643525	five period of Gastrodia elata	9.780
	SRR5643528	five period of Gastrodia elata	11.100
	SRR5643658	five period of Gastrodia elata	10.960
	SRR5643659	five period of Gastrodia elata	10.510
	SRR5643660	five period of Gastrodia elata	9.610
	SRR5643661	five period of Gastrodia elata	9.000
	SRR5643662	five period of Gastrodia elata	9.800
	SRR5643663	five period of Gastrodia elata	10.190
	SRR5643664	five period of Gastrodia elata	8.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.780
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.380
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.100
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.710
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.640
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.590
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.370
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.490
SRP279888	Gastro	Gastrodia elata tuber	11.31
	Juven	Juvenile tuber	10.79
	Mother_Gastro	Mother tuber of Gastrodia elata	7.96
	Mother_Juven	Mother tuber of Juvenile	7.18