Detail information of GWHGAAEX003441/evm.TU.scaffold_135.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672124068|ref|XP_008785412.1|1.09E-116PREDICTED: extensin-like [Phoenix dactylifera]
trEMBLtr|M0RI10|M0RI10_MUSAM2.00E-93Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P13840_001}
TAIRAT1G073102.00E-47Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000133217341218828+
Transcript Sequence

Network for GWHGAAEX003441

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00168.29C2161131.80E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.880
SRR2545915Juvenile tuber47.700
SRP108465SRR5643513five period of Gastrodia elata72.860
SRR5643514five period of Gastrodia elata76.310
SRR5643515five period of Gastrodia elata81.330
SRR5643524five period of Gastrodia elata80.860
SRR5643525five period of Gastrodia elata149.980
SRR5643528five period of Gastrodia elata163.720
SRR5643658five period of Gastrodia elata165.820
SRR5643659five period of Gastrodia elata83.250
SRR5643660five period of Gastrodia elata80.060
SRR5643661five period of Gastrodia elata85.190
SRR5643662five period of Gastrodia elata91.340
SRR5643663five period of Gastrodia elata81.800
SRR5643664five period of Gastrodia elata86.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_183.700
SRR6049655Rhizomagastrodiae_C368-T10_good_1130.290
SRR6049656Rhizomagastrodiae_C368-T07_good_195.120
SRR6049657Rhizomagastrodiae_C368-T07_good_179.850
SRR6049658Rhizomagastrodiae_C368-T04_good_178.240
SRR6049659Rhizomagastrodiae_C368-T04_good_185.220
SRR6049660Rhizomagastrodiae_C368-T01_good_182.290
SRR6049661Rhizomagastrodiae_C368-T04_good_181.810
SRR6049662Rhizomagastrodiae_C368-T01_good_185.650
SRR6049663Rhizomagastrodiae_C368-T01_good_187.030
SRR6049664Rhizomagastrodiae_C368-T10_good_1109.420
SRR6049665Rhizomagastrodiae_C368-T10_good_1109.420
SRP279888GastroGastrodia elata tuber 90.13
JuvenJuvenile tuber91.80
Mother_GastroMother tuber of Gastrodia elata 105.47
Mother_JuvenMother tuber of Juvenile 91.49