Detail information of GWHGAAEX003447/evm.TU.scaffold_135.14
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|602617382|dbj|BAO57285.1| | 0 | bifunctional glycerol-3-phosphate 2-O-acyltransferase/phosphatase [Ipomoea nil] |
| Swissprot | tr|O80437|GPAT6_ARATH | 0 | Glycerol-3-phosphate 2-O-acyltransferase 6 |
| trEMBL | tr|X5IDC4|X5IDC4_IPONI | 0 | Bifunctional glycerol-3-phosphate 2-O-acyltransferase/phosphatase {ECO:0000313|EMBL:BAO57285.1} |
| TAIR | AT2G38110 | 0 | glycerol-3-phosphate acyltransferase 6 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000133 | 483559 | 486797 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003447
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12710.6 | HAD | 17 | 198 | 1.80E-13 |
| PF01553.20 | Acyltransferase | 303 | 402 | 2.40E-06 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13508 | GPAT | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Glycerolipid metabolism | map00561 | ||
| Glycerophospholipid metabolism | map00564 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016746 | Molecular Function | transferase activity, transferring acyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.700 |
| SRR2545915 | Juvenile tuber | 6.070 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 41.820 |
| SRR5643514 | five period of Gastrodia elata | 23.250 | |
| SRR5643515 | five period of Gastrodia elata | 39.970 | |
| SRR5643524 | five period of Gastrodia elata | 39.680 | |
| SRR5643525 | five period of Gastrodia elata | 4.900 | |
| SRR5643528 | five period of Gastrodia elata | 5.970 | |
| SRR5643658 | five period of Gastrodia elata | 1.650 | |
| SRR5643659 | five period of Gastrodia elata | 14.630 | |
| SRR5643660 | five period of Gastrodia elata | 21.610 | |
| SRR5643661 | five period of Gastrodia elata | 12.750 | |
| SRR5643662 | five period of Gastrodia elata | 12.980 | |
| SRR5643663 | five period of Gastrodia elata | 2.420 | |
| SRR5643664 | five period of Gastrodia elata | 3.630 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.320 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 24.980 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.890 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.620 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.640 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.390 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.090 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.060 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.170 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 55.600 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 28.680 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 28.680 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.64 |
| Juven | Juvenile tuber | 12.62 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 343.70 | |
| Mother_Juven | Mother tuber of Juvenile | 135.30 |