Gene detail

Detail information of GWHGAAEX003450/evm.TU.scaffold_135.17

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1303	Amino acid transporters
nr	gi\|645255956\|ref\|XP_008233733.1\|	PREDICTED: auxin transporter-like protein 1 [Prunus mume]
Swissprot	tr\|Q5N892\|LAX1_ORYSJ	Auxin transporter-like protein 1
trEMBL	tr\|W1PPM7\|W1PPM7_AMBTC	Uncharacterized protein {ECO:0000313\|EMBL:ERN09739.1}
TAIR	AT5G01240	like AUXIN RESISTANT 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000133	582868	587346	-

Transcript Sequence
>GWHTAAEX003450 ATTCTCGACGGCTCTGTCCCCCACTCTCTTTAAGAAGTTATAAGAGCAGCGCAGCACTGACAGCTGCATCCATTCACCGGCGCCGTTCACTTCCCTTCTCTTCCATCTCATCTTCCCCCCATTTCAATAAAGCACATTCATTCATTCATTCAATCAAAGAAACAGAGCATCCCTCTTCTCCATTCCAAACAGCAAGCCGGCAAAGAAGAGATGTCGCCTCCAAAGCAAGCGGAAGAGGCCATTGTGTCTGCCCGCGAAGCCACGAACATGAAAGAAGAAGAGGACGCCCCCACAGATTCCCCTGCTCGCATCAACCTCAAATCCCTTCTCTGGCACGGCGGCTCCGTCTACGACGCCTGGTTCAGCTGCGCCTCCAACCAAGTGGCGCAGGTGCTTCTGACGCTCCCTTACTCTTTCTCCCAGATGGGAATGGCCTCCGGAATCACCCTCCAGATCTTCTACGGCTTGATGGGAAGCTGGACCGCTTACCTCATCAGCGTTCTCTACATCGAGTACCGCACCAGGACGGAGAAGGAGAGCGCCAGCTTCAAAAATCACGTCATTCAGTGGTTCGAAGTGCTCGACGGGCTGTTGGGGCCTTACTGGAAGGCCATCGGGCTCTCCTTCAACTGCACCTTTTTGCTCTTCGGATCTGTCATTCAGCTCATCGGCTGCGCCAGCAACATATACTACGTTAACGATCGGCTGGACAAGAGGACGTGGACGTACATCTTCGGGGCCTGCTGCGCCACGACAGTGTTCATCCCATCGTTCCATAATTACAGAATCTGGTCCTTCCTCGGCCTCGGCATGACTACTTTCACAGCCTGGTACCTCACCATCGCCGCCTTCATTCACGGCCAGGAGGAGGGGTTGATTCACAGCGGGCCGACGAAGCTAGTGCTCTACTTCACTGGCGCTACCAACATACTCTACACTTTCGGCGGCCATGCCGTAACTGTTGAAATAATGCACGCGATGTGGAAGCCGCAGAAGTTCAAGTCGGTGTACCTTCTGGCCACGCTGTACGTCTTCACCTTGACGCTGCCTTCGGCGGCGGCGATGTACTGGGCGTTCGGCGACCGTCTGCTGGACCACTCGAACGCCTTCTCCCTTCTGCCGAAGACGAGGTGGCGCGACGCCGCCGTGATACTGATGCTGATCCATCAGTTCATCACGTTCGGCTTCGCCTGCACGCCTCTGTACTTCGTGTGGGAGAAGGTTATCGGCATGCACGACACGAGGAGCATTGCGCTGAGGGCCCTCGCCCGTCTCCCTGTCGTCGTCCCCGTCTGGTTCCTCGCCATCATCTTCCCCTTCTTCGGCCCCATCAACTCTGCCGTCGGGGCCCTCCTCGTCAGCTTCACCGTCTACATCATCCCCTGCCTCGCCCACATGATCACCTATCGGAGTGCTGCCGCTAGAAAGAACGCAGCAGAGAAGCCGCCGTTCTTTCTGCCGAGCTGGACCGGGATGTACACCGTGAACCTCTTCATAGTGGTTTGGGTCCTTGTGGTCGGATTCGGGTTTGGAGGTTGGGCCAGCATAACGAACTTCGTCAAGCAGATCAACACGTTCGGCCTCTTCGCGCGGTGCTACCAGTGCGGCTCTAAGCCTCCCGTTCCCGCTCCGCCGCCTCTCCCTCGCCACTGAGGAATTTTGCTGAAGGCATCATCATGGACACAAGCAGCCGCGGCTTCCCTTTTTCTAATTTATTAGTGACTTTTTCCTTCTTTTTTTCCAATGGGTGATTAATGCTCTTATTATATGTATGAAATTCAAAGCTTGGCTTGCATCATTTAAAGAATTATAGTTCGTTCTCTGGAGAGTACTGATCCAAGCATTAACAGTTTTTTCTCCCATTAGATGAATAAGGGTTAAAATAAAGAATGCTGAGGGCGTGGTGGGTTATAATTATTAGAAACACGTTCTTCCTTTGAGACGCAAAAGCCTGGGGGCTGCCTTTTTCGCACGCTGCTGCACTTTTACCATGTCCGCATTGAAGAAGGCCGAGAAAGAAGAAGAGGAAGAAGATCGAGCTGCTCTTCTCCATTAAATATTCCTTCTGTTCTCTTGGATCTTTTTTGCCCATTATTACTATACAACATCTTGTCCCCCGTAGAACATGGCGTGGCAGGATTATTTAAATGTTCTTGTTGCCTGCCTTTGAATGCTTCCTTCCTTTAGAGCAAGTATTATTAAAGGGGTTTCTAAGAAAATCATCAAAGGGAAGGGAAAGAAGAAAGAACATCTCACATGACTTGCTCGTTAAAGAAAGCAGACATAATGTGGAAAGGGGTGGAGCTTTCAGGATGGAAGATTGCAGAGATTGTTTGATTTTTATTACATATCACCCCAATAAATAAACAATGGGTAGGCACCGCATTCCTTTGACTAATTGGGATTGATGCTATCTTTTTAACTATTTTAACAAGTATCTTAAAAGTATCTTATTTTCAACTAAAAATAAGTTATGAATGAGATAGATGCTTCTAAAAAATGTTATCATAA

Network for GWHGAAEX003450

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01490.17	Aa_trans	42	435	2.10E-75

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13946	AUX1, LAX	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.200
SRP064423	SRR2545915	Juvenile tuber	0.940
SRP108465	SRR5643513	five period of Gastrodia elata	3.030
	SRR5643514	five period of Gastrodia elata	3.380
	SRR5643515	five period of Gastrodia elata	3.020
	SRR5643524	five period of Gastrodia elata	1.960
	SRR5643525	five period of Gastrodia elata	69.820
	SRR5643528	five period of Gastrodia elata	48.600
	SRR5643658	five period of Gastrodia elata	101.640
	SRR5643659	five period of Gastrodia elata	1.830
	SRR5643660	five period of Gastrodia elata	1.010
	SRR5643661	five period of Gastrodia elata	1.420
	SRR5643662	five period of Gastrodia elata	6.790
	SRR5643663	five period of Gastrodia elata	6.200
	SRR5643664	five period of Gastrodia elata	6.250
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.370
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.940
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.750
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.330
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.150
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.280
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.730
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.730
SRP279888	Gastro	Gastrodia elata tuber	3.06
	Juven	Juvenile tuber	0.45
	Mother_Gastro	Mother tuber of Gastrodia elata	0.59
	Mother_Juven	Mother tuber of Juvenile	0.15