Detail information of GWHGAAEX003451/evm.TU.scaffold_135.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|697102832|ref|XP_009603294.1|1.14E-32PREDICTED: 30S ribosomal protein S31, chloroplastic [Nicotiana tomentosiformis]
Swissprottr|O80439|RR31_ARATH8.00E-2430S ribosomal protein S31, chloroplastic (Precursor)
trEMBLtr|V7AJY2|V7AJY2_PHAVU2.00E-31Uncharacterized protein {ECO:0000313|EMBL:ESW05912.1}
TAIRAT2G381403.00E-23plastid-specific ribosomal protein 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000133740503741390+
Transcript Sequence

Network for GWHGAAEX003451

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17067.4RPS31201008.90E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.040
SRR2545915Juvenile tuber25.030
SRP108465SRR5643513five period of Gastrodia elata41.290
SRR5643514five period of Gastrodia elata54.660
SRR5643515five period of Gastrodia elata50.990
SRR5643524five period of Gastrodia elata51.630
SRR5643525five period of Gastrodia elata36.870
SRR5643528five period of Gastrodia elata46.990
SRR5643658five period of Gastrodia elata48.100
SRR5643659five period of Gastrodia elata46.530
SRR5643660five period of Gastrodia elata41.260
SRR5643661five period of Gastrodia elata55.160
SRR5643662five period of Gastrodia elata54.570
SRR5643663five period of Gastrodia elata49.120
SRR5643664five period of Gastrodia elata45.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.890
SRR6049655Rhizomagastrodiae_C368-T10_good_176.890
SRR6049656Rhizomagastrodiae_C368-T07_good_148.050
SRR6049657Rhizomagastrodiae_C368-T07_good_137.160
SRR6049658Rhizomagastrodiae_C368-T04_good_135.050
SRR6049659Rhizomagastrodiae_C368-T04_good_124.410
SRR6049660Rhizomagastrodiae_C368-T01_good_139.950
SRR6049661Rhizomagastrodiae_C368-T04_good_140.550
SRR6049662Rhizomagastrodiae_C368-T01_good_157.580
SRR6049663Rhizomagastrodiae_C368-T01_good_147.670
SRR6049664Rhizomagastrodiae_C368-T10_good_169.740
SRR6049665Rhizomagastrodiae_C368-T10_good_169.740
SRP279888GastroGastrodia elata tuber 48.26
JuvenJuvenile tuber39.03
Mother_GastroMother tuber of Gastrodia elata 56.25
Mother_JuvenMother tuber of Juvenile 32.12