Detail information of GWHGAAEX003452/evm.TU.scaffold_135.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743790070|ref|XP_010923075.1|8.05E-86PREDICTED: pleckstrin homology domain-containing protein 1 [Elaeis guineensis]
Swissprottr|Q9ST43|PH1_ARATH1.00E-67Pleckstrin homology domain-containing protein 1
trEMBLtr|I1HIX2|I1HIX2_BRADI7.00E-81Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G23770.1}
TAIRAT5G057101.00E-76Pleckstrin homology (PH) domain superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000133766992767447+
Transcript Sequence

Network for GWHGAAEX003452

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00169.28PH291244.30E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.150
SRR2545915Juvenile tuber69.850
SRP108465SRR5643513five period of Gastrodia elata125.350
SRR5643514five period of Gastrodia elata109.660
SRR5643515five period of Gastrodia elata117.740
SRR5643524five period of Gastrodia elata99.690
SRR5643525five period of Gastrodia elata245.090
SRR5643528five period of Gastrodia elata162.830
SRR5643658five period of Gastrodia elata174.260
SRR5643659five period of Gastrodia elata169.870
SRR5643660five period of Gastrodia elata220.120
SRR5643661five period of Gastrodia elata200.810
SRR5643662five period of Gastrodia elata217.190
SRR5643663five period of Gastrodia elata182.590
SRR5643664five period of Gastrodia elata252.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1152.460
SRR6049655Rhizomagastrodiae_C368-T10_good_1153.000
SRR6049656Rhizomagastrodiae_C368-T07_good_1151.100
SRR6049657Rhizomagastrodiae_C368-T07_good_1163.360
SRR6049658Rhizomagastrodiae_C368-T04_good_1194.200
SRR6049659Rhizomagastrodiae_C368-T04_good_1219.460
SRR6049660Rhizomagastrodiae_C368-T01_good_1172.240
SRR6049661Rhizomagastrodiae_C368-T04_good_1173.450
SRR6049662Rhizomagastrodiae_C368-T01_good_1157.230
SRR6049663Rhizomagastrodiae_C368-T01_good_1164.440
SRR6049664Rhizomagastrodiae_C368-T10_good_1156.170
SRR6049665Rhizomagastrodiae_C368-T10_good_1156.170
SRP279888GastroGastrodia elata tuber 179.25
JuvenJuvenile tuber164.38
Mother_GastroMother tuber of Gastrodia elata 129.61
Mother_JuvenMother tuber of Juvenile 132.12