Gene detail

Detail information of GWHGAAEX003453/evm.TU.scaffold_135.22

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189502744\|ref\|YP_001958461.1\|	2.00E-27	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOG	KOG1187	6.00E-159	Serine/threonine protein kinase
nr	gi\|672123993\|ref\|XP_008785370.1\|	2.53E-173	PREDICTED: putative serine/threonine-protein kinase [Phoenix dactylifera]
Swissprot	tr\|C0LGN2\|Y3148_ARATH	9.00E-101	Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 (Precursor)
trEMBL	tr\|J3LM97\|J3LM97_ORYBR	4.00E-161	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB03G21730.1}
TAIR	AT3G09010	6.00E-159	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000133	776532	783220	-

Transcript Sequence
>GWHTAAEX003453 GACGACTGTGTAAGAAAAAAATTGAATGGCCTGCCTCTTGCCCTTTAGATTCCCGGCTTCTGATTTTTATAGAAGGAAGAGTTAAAGGTGAGAGGAATCGAAAAAGGAAAAATGAATCTCGTTTTGGGAGTCTGCGGATAAGGTCAACATGCTACTATGAAACTAAGATGAAGAAAAACGTACATGCCAACAGAATGGGAACAATGTTTAGCTGCTTTAGTCTTCTAAAATGTTCAATAGTGAGCCGTCCAAGAGAATCCATCTTAGACCAAATAGGAGCGCGATCTCCATCATTACATAACATTCGTATGTTTTCTTATAATGAGCTTGCTTCGGCCACAAGGAGCTTTCATCCAACAAACAGAATAGGGCGAGGTGGCTTTGGAATGGTGTATAAAGGGATATTAAAGGATGAAACTCAAATCGCAATAAAATCACTCTCTGCCGAATCAAATCAAGGAATCCATGAATTTTTGACCGAAATTGAAATGGTGTCGAATATTAGGCATCCTAACCTGGTTCGTTTGATTGGCTGTTGCATTGAGCGTGCTAAGCGTATGCTTGTTTATGAGTACTTAGAAAACAACAGTCTTGCTTACATTCTGCTTGGCCCTCTTAGTAAACAAATCACTTTAGATTGGCCGAAAAGAGTTGCAATTTGTTTGGGCACTGCTAATGGACTTGCATTCCTTCACGAGGAAGCCGAACCCCACATTGTCCATCGTGATATCAAGGCTAGTAATATTTTGCTCGACCAGAACTTAGTGCCAAAAATTGGAGATTTCGGTTTGGCAAAGCTTTTTCCTGATACAGTGACTCACATCAGTACTCGTGTAGCAGGGACCATCGGCTATTTGGCACCTGAGTATGCTTTGCTAGGGCAATTAACCAAAAAAGCAGACATCTACAGCTTCGGGGTTCTTATGCTTGAAATAATTAGTGGGAAAGGGTGTGCGAGATCGGTATGGGGTCTCGACAACAAGGTTCTTTTGGATTGGACATGGCAGCTGAGGAATGAGGAGAGTAGGGTGTTGGATATAGTGGACCCCAAGCTCGAAGAGTACCCAAAGGATGAAGTCCTGCACTATATTAAGGTGGCTCTTCTTTGCACACAAGCAGCATCTCAACAAAGGCCCAACATGAAGCAAGTGGTAGAAATGTTGAAGCCCGAGGGTTTTCAGATGCATATTGATGTGGTGAACCTGCAGCAGCCGGGTGTGGTCAAGAAGTCGGACCGTACATTCGTGATTTCGGATAAACTGAGAAGCAGCTCTCAGTTGTTGTCGAGAGACACTGATGGCTCTGTATCCACCTTAGCTGGGAAGCCTGCCAGGAGCTCTTTTGAGCTGCATCCAAGGTGAATAACATTGAAACTTTAGTGTCCAAACATATATCAGGTGCTCACTTGTCTTGTATTTTTAGAATTGCAGACAAATTGATAGATGGTTTAGATGGATATCAGTGTGTATTAAGTTGTTTAAAATTTGATTTATTAAATTTAAATAATGTTGAATTATAGGCTTTTAGGGTATGTGTGCCTTTGAATGCACAATCAAGGAACAGTTGTATTAAGCCGAGGTGCAATGAAAGGACCTGCTATTAAAATTTATGGTTTCGAACAGCCAAGTTTAAACTGGTGTGCCTTTTTTATCTAGCTTGAGACCTGAATGC

Network for GWHGAAEX003453

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.16	Pkinase_Tyr	64	332	1.70E-47

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_DLSV

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	51.320
SRP064423	SRR2545915	Juvenile tuber	54.840
SRP108465	SRR5643513	five period of Gastrodia elata	33.010
	SRR5643514	five period of Gastrodia elata	26.740
	SRR5643515	five period of Gastrodia elata	33.840
	SRR5643524	five period of Gastrodia elata	31.000
	SRR5643525	five period of Gastrodia elata	24.180
	SRR5643528	five period of Gastrodia elata	25.850
	SRR5643658	five period of Gastrodia elata	28.490
	SRR5643659	five period of Gastrodia elata	38.170
	SRR5643660	five period of Gastrodia elata	36.850
	SRR5643661	five period of Gastrodia elata	39.680
	SRR5643662	five period of Gastrodia elata	41.790
	SRR5643663	five period of Gastrodia elata	34.300
	SRR5643664	five period of Gastrodia elata	32.730
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	27.200
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.110
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	37.100
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	36.260
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	34.390
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	36.280
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	35.700
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	35.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	33.930
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	32.460
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	34.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	34.450
SRP279888	Gastro	Gastrodia elata tuber	35.00
	Juven	Juvenile tuber	34.56
	Mother_Gastro	Mother tuber of Gastrodia elata	51.92
	Mother_Juven	Mother tuber of Juvenile	39.82