Gene detail

Detail information of GWHGAAEX003459/evm.TU.scaffold_135.28

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|449090318\|ref\|YP_007422759.1\|	1.00E-12	hypothetical protein HD73_3660 [Bacillus thuringiensis serovar kurstaki str. HD73]
KOG	KOG3035	7.00E-118	Isoamyl acetate-hydrolyzing esterase
nr	gi\|566197432\|ref\|XP_002318054.2\|	1.10E-130	GDSL-motif lipase/hydrolase family protein [Populus trichocarpa]
Swissprot	tr\|Q9FM04\|GDL88_ARATH	2.00E-118	GDSL esterase/lipase At5g62930
trEMBL	tr\|M0Z554\|M0Z554_HORVD	3.00E-132	Uncharacterized protein {ECO:0000313\|EnsemblPlants:MLOC_77319.1, ECO:0000313\|EnsemblPlants:MLOC_77319.2}
TAIR	AT5G62930	7.00E-118	SGNH hydrolase-type esterase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000133	1077896	1125754	-

Transcript Sequence
>GWHTAAEX003459 ATCTGGGGCGGACGAACAAACTCACGATGGATCAACTACGGCCTCGCTTCGTTCTGTTCGGAGATTCAATCACTGAGCAATCCTTCTCATCCGGTGGGTGGGGATCGGCTCTTGCTAACACATATGCCAGAAAGGCTGATATAATTGTTAGAGGCTATGGTGGATATAACACCAAATGGGCTTTGTTTCTGCTTAATCGCATATTTCCATTGTGCACAGACGTTCCTGCTGTCACGACTGTTTTCTTTGGGGCAAATGATGCTGTTATCTTGGGAAGAACTAGTGAAAAGCAGCATGTTCCTGTTGAAGAGTACAAGCAAAATCTCCAGAAGATTGTTTATCATTTAAAGGAATGTTCACAATCTATGCTGGTAATTTTAATAGCCCCACCACCGGTTGATGAGAATGGGCGCAATGAATATGCACGATTTCTGTACGGTGATAAAGCCAGAGAGCTGCCAGAAAGAACAAATGAAATGACTGGAGTTTATGCAAAAAAGTGTATTGAGCTTGCTCAGGAGTTGGGTTTGCCGTATGTTGATCTATGGTCTCGCATGCAAGAAACTGCAGGCTGGCAGAAAAAATTCTTGAGGGATGGCTTGCACTTGACTCCAGAGGGAAACGCTGTTGTCCACAAAGAAGTGGTAAGCTTGCTGCATAGCGCAGGTCTTATAGCAGAAGATATGCCCTATGATTTCCCTCATCATTCCCAAATCGATGGAATGCACCCTGACAAAGCATTTAGAAGGTAATGGAGATTCATACCGCCTTGGCCATTCCTTCAAACCATTAATTTGTATGATCGAATACTAGTAAGCTGTCATATTTATGAATTGAATAACAATGAGGAACAAAATTTTGACGCATATCTATCTTACAATTGATTGCTAATGCATCTTATAATGATGACATCATTGACACATACAAGAATTCCTAATAAATTCTCGTGTCTTCAAATTCGTTGTAAATTGTACCCGTGCATCATGATTTTGAAAGTTGACATCATCTAACATTCAAATATTTATCAAAATATTCACAATTTGATCATGATATGTCCAAGAGCAAGGCCTACAAAGAATGTAATTTGTGAATATTGGTTTAAGCCTAAGATATCATATATCAATCACAAAAGAATAGACAAAAGGGAAAAACCCTAGAAAGAGGCTATTATAGTATCCTCATAAAAAATACACCCAAAGGATACCGAAAAGCCTGAATAGAATGCCCATTATGCCCAAAAAGTAAAAATTTCCTACTTTAGGCCAAAGAAGCACAATAACCTGACGAGCGGCTACAATTATGAGTAAACAAATCGATACATACATCAATAAAAATATAAATGGATCAGATCGAATGCAGTTTCCATCTTACACTTCAAGCGTTCCCAATGTTTTTTTGGTTTCGTGAAATAACATACATCTTCACCCTTGATAATAGTATTGTCTGACCTGCTCACCACTTCTTAGACACCCTCATAATTAGTAATGCTACTAGGATTTCCTTCCCCAGCGGGGACTGAGCCTATGTCCTAGGCCCACAAGCTGAAAGGAGCTCATCACGAATGACAACTCTGCCGTAAGCCACTTGTTTCTCATGTAGAAAGGAACCATCAAGACTGTTCTTGAACTAATTAGGTGGGATGGCACCAACAACATGAGTGCTAGAAGGGTGTGGCGGTTTACGGACCCCACACCAAGGATCAATCCAACATTGAAGACAATGACAATGAATGAACTAGCACAAATCATTAGTGTAAGAAATGGTTGCTCGTGCTTCTTTGCCAAAGTACTTCTCCAAGCTTGGTAAAGAACATAGCTGAAAATTTGCATCATAGCCTAATCATGGTCACAAAGCTTTCACAAAAGAGTTCTATATGCTGGCATAAGGAGTTCTTGATCCCAGCTCCTTTTGGTCATAAGAAAATAAACCACTATCTGTTAATTCAACTCCTTGAAGTTCCTTTAATTTGTAGATAAATGGATGCAGCCAAGAGATGTTCAATTATCACTGAGGACATGGATGTCTTAGCCTTGCCCGATCCTCCTCCGAGTCTGTCGGCAAACCACCTTACAGCCCTTGCAGGGAAGACGCTGAACTGCTGAATTAGCCTGCTTAACCATGAATTCCTGCCTTTGTCACGATATTCGACCTCCATGACATGCACCCAAAGCAGATCTTCGCGGTTCAAAAAAGTTGAACCTTTGTCTTACAACCAGCACATGCAACCGCACTCTCAATTTTCGAATTCTAAGTTCGACAGCCGTAATTGTTGCTGTATTCCAAGTTCCTAGTATTCAAGCCCTCCCAAAGGAGCGCTTGGATGATTAACTCAACGTCAAGAAGGCATGAGTCTGTAATATGAGATAATATCATTGTCTAGACTGAAATAGTGGATATGATTGATTTGATTAAGCAAAATCTACCCAGCATAGAGAGAACATGATGCTCCCCATCCACCAATAAGTATTCTGAACAATATGGTCCCCAAATATCTCATCTTGTTATACCTGTTATAGCCTATAAGATCTTATTGCTTTACATAGAGTTTCTTTTGCGAAACATTTTTGTGATATATTTGAGACAAAGCCCTCCCCAAACTTCATTATTAAAAAAATTTACTGCTTTTTAAGAATAGAACTATACTTCTCAATCCGTATCACTATAATGAGTAAAAATGAGAGAATCAAGAGATCAAGAGTTGACTTTGATTTTGAGTTTAGCTCGCTAGAAATAATTCTAGTTTAAGTCAACTCAAAATTGATTCAAAAAATAAAATACTAAATTATAAAAATAGGAAAACATATGTGATAAATGAACTTACCAT

Network for GWHGAAEX003459

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00657.21	Lipase_GDSL	9	204	3.00E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.590
SRP064423	SRR2545915	Juvenile tuber	5.100
SRP108465	SRR5643513	five period of Gastrodia elata	4.600
	SRR5643514	five period of Gastrodia elata	6.340
	SRR5643515	five period of Gastrodia elata	6.070
	SRR5643524	five period of Gastrodia elata	6.380
	SRR5643525	five period of Gastrodia elata	6.300
	SRR5643528	five period of Gastrodia elata	6.400
	SRR5643658	five period of Gastrodia elata	6.920
	SRR5643659	five period of Gastrodia elata	3.510
	SRR5643660	five period of Gastrodia elata	4.410
	SRR5643661	five period of Gastrodia elata	3.760
	SRR5643662	five period of Gastrodia elata	3.920
	SRR5643663	five period of Gastrodia elata	4.850
	SRR5643664	five period of Gastrodia elata	3.980
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.780
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.870
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.860
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.430
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.020
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.430
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.430
SRP279888	Gastro	Gastrodia elata tuber	3.42
	Juven	Juvenile tuber	5.46
	Mother_Gastro	Mother tuber of Gastrodia elata	7.06
	Mother_Juven	Mother tuber of Juvenile	9.35