Gene detail

Detail information of GWHGAAEX003472/CADD00306.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000133	1645179	1649000	+

Transcript Sequence
>GWHTAAEX003472 AGGCAATCCTACTGCTACTAATACTAGAATGGCAGAATGTAAAGAGCTAGAGCTAAAGTAAAGAAAGCTAATCTATTTAATTAAGTAGTGCAAAGAGGAAGTCGCTAGAATGACACTTGCCTTCTTTCTTATGGCTGGTGATAGTAAAACATACTACCTACGAGTCTCATTCTCTCGCATTCGTCCTTACCTCTGTTCTTGTTCTATTCTATTATCCAGTTTAGCTATCAACTTTATTAAATATCTATTACACAAGGAAAAAGACTTGCATCAATCAATGGCATGAAGGAGTTGAATCAGGAACAGAAAGAATCTGAGAAAGTCATTCCGCTACGCGGCCTTTCCTTCTTTGCCTTCTAGCTCTCCAAGTGGAGTTGTCAATACCAAGCCAGTTTCAAGCAAAGTAAAGGAGCCATTCTCAAGTAGGCCGCTTTCAGTCCTCTCATTGGTAGTGGGATGGAAGTGCGGGGGAAAGATTTTGGGTGAACGACTGGGATGATTAGATAGTTTCTGGCTTTCAAGGCATTCTTAAGCACGGGATGGAGAAAAGCCAAGCTGCGGTTATAAATCAAAAGAATCGTCCGCTCTCTAAAGAATTCGGAGCTCTCTACGCAGCTCTTTCCTCTCAGGTCTTTTCGTAGATTAAAAGAAGGTAAAAGAAAGAGCCCGGTCTAAATATAGATTTGCTTGATTGATTTGCAAACAGCGGGGCTTATAGATAGAAAATGGTTTCAAGTGTCTCCAAGAGCATAAACTCAAATGTTTTTTCCACCTTTTGAAAAGTAGTTGATCTGGTTATTCGACTACGAGTGAGAGTCCGAACGGATTCCTAACCCCCTTCCGAAACTGGCTGGAAGAACGGATCCTTTCTTCGTCACAAGTGTGCTTGGAATCTAAGTTTTGTGAGCTCTAATGCCGAAAAGGGTCTTTAAGGGGAGGTACTGAGCCGATAGCTTTAGACCGATCCCAGCTCAACACTGCTAATCAGAAGAAAAGCCCTCCTCATTCGTAGCCGTAGTCTGGTTTCAGCTCTTATTTGATGTCGAGCGAAGCGACTACCGCGACTATGTTCCTAGTAAAATGGAAGTTCTGGAATTTCCGACATAACTCCTTTAATGGGGGAACGAAGGTCTCATCCAGAAGGTGCACGAATGGCTTGACGGCAATTTTTTTTCCTTTGCTTGGGGAATTCAATTGCTCAGTACACTGTTTGGAATTTCATGCTTTGTTTAAAGCAACTAGCATACCATTTGGAACAATAAAGAAGCTTAATTTTCTGTGTATGAGATTTCTACTTATGACCACCAATCCGAAAATTATACCCATTAAGCTGTAATTCGATCAAAACTCCTCTAATTAAAGGAGGCCTTAGCCTGCTTCTCATGATGCTTTATTGGCTAGTTGCAAGTTTGACCTCCTTTTAAGGATCTCTAAGCAACTCATTATTGTGTAGGTCGTGGTCAGCTAATGACATAACCTTGTTTCCCAATGCTAGTAGCATTTCCAGCATATGCAACTTTTTATTTTTATATTCTGGGAACTTTTATGGGAAATCAACAATAAGATGTTTGAGGAGATACGCCAGTGTGTATTTGAATCATTCTCTGCTTTCAAATCGACAGGTCAGTTCATATTACAATGCCTTATTCAATAGTAAAAGATCCCACATGCAAAAGAATACGAACAGCTTTGGTTTTCACAAGTCATCGCTGCTAAAAAAATTTATTTTGATATGGTTTTGTGAAGTATAGATGTTTCAATAATAAAAAAAGTATGAGCATTTTCAAGATTTTCTTGTATTCACAAAAAAATTGTTGGTTGCATCTAAAACTGCATAAAAACTTTATTACAGCAGTTGGCATGTGCTGTTTAGTAGAATATGAAACACACACTTATACGTTAATTGTCACTGCTCAATTGAAGTTAAAAAAAAACTTCTCCATTTGATACCTGTTGAATTGAACCTTATAATTTCTAGTGGATTTGAATCTTTTATATGGGTTGTTTCAAGTATAAATGCAGTATTTTAATTGGGATGTAGCTCAAATGGTAGAGCAATTGCATTATATGCTGAGAGGTTCAGGGTTCGATCCCCTGCATCACCAAATAATAATAATTTCTATTCTATTTTCTTCTTATCAAGTGTATGGTATATTCGCTAACATTTTTTGCCGCTATATTCTTACAACATTTTGGTCATTAGCTCTGCTAGGAAATTGTTCATCATTCAGTTTGATTAAAGTCGGATGATCAACCACTCAACATTTTGTAAAAAAGAGCTGAAATGTTGAATAAATAATAAATATGCTCACTACAACCGTAGCAGAAAAATTTACCCACGTATTACAGCCATTAATATAACACCTAAAACAGTAGGATTTATGCATCTCACACTAACAGTACAAGTATTACAGTCATAACATTAAAATCTACAAAACTTGCAAGAAAACTTTTTCATTTGACACCATAAACACAAAGAGAGAAGCAGTGCCTACATCAAGAGGGCAGCAGTGCCCCCCAAAGGAAAATGATGGGTTTTGTTTATCACTAATACGCACCAATGTTTGACATTCAAACATATTCTTAAGAATGCTATCTTCTAATGTTCTGCCACACCATTTTTTTATGTGGCATATATTATGCTGCCAATTGTTTTTTTATTCGTTAATCTTCACAAAATTCTTCTAATTCTTGATAGATGAAAAGCAACGCCTTCTTACACTTTTTTCCTTTCTCTTTTAGAATAATTTTGATGATTTTTCATAATTGTTTCTTCTTTGATTTTTGGCTCTATATAGCTCTTTTCAATTCCGACCAATGCATCTTGGCTTCGAAGTAGTGCCTTCGTAAGAATGCTCCTCCACTTCATGTGGTCTCCTTGTGAGACATGGTGTAAGAAGTAGATCGAGGAAAGAATTTTTTCTCTTAAATCTCTTCCTTGCAAAATTTGCACACAAGTATGAGCTACATAGTTGAGACAGATGGCATCACTGATGGTGAAGAAAAGGTTCAAGGGTCGTGCTGTTTGGGTCCTCGGCTTATAAACACAGAGAGGGAGAGGGATTGCATCAAACCATGGGGGCAGTGTTGCAAGTCATGATGGGCATAAAATTAATTGGATAATCATTGATGTCTCTAGCATTGGGTGGGGACAAAGGCCTCTGAAGTTCGAGATCTTTGACGTTAGAAGAAAATTAGAATGCCATGTGGGCATGAGTCTCAGACCTTTGGTGGTGCAAATGGCAAATGAGAGATTGAGTTGTAGATGGGTGGGAGACTGGTTTTAAGATCAAAGCTATTGTATTGTCTGACAGGTAAAAAGTAGATCATGAAGGAAGTTGTTACAATATCTCTATTTGTACTCTTATCGGTGCTCCAGCATCATTAAAATATTTAATCTTAATGTTTAACTCATAATAATTGAGATTCACTAGTAAAAATCAAA

Network for GWHGAAEX003472

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module9

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX003472
RQSYCYYNGRMRARAKVKKANLFNVVQRGSRNDTCLLSYGWNILPTSLILSHSSLPLFLFYSIIQFSYQLYISITQGKRLASINGMKELNQEQKESEKVIPLRGLSFFAFLSKWSCQYQASFKQSKGAILKAAFSPLIGSGMEVRGKDFGTTGMIRFLAFKAFLSTGWRKAKLRLIKRIVRSLKNSELSTQLFPLRSFRRLKEGKRKSPVIICLIDLQTAGLIDRKWFQVSPRATQMFFPPFEKLIWLFDYEESERIPNPLPKLAGRTDPFFVTSVLGIVLALMPKRVFKGRYADSFRPIPAQHCSEEKPSSFVAVVWFQLLFDVERSDYRDYVPSKMEVLEFPTLLWGNEGLIQKVHEWLDGNFFSFAWGIQLLSTLFGISCFVSNHTIWNNKEAFSVYEISTYDHQSENYTHAVIRSKLLLKEALACFSCFIGLQVPPFKDLATHYCVGRGQLMTPCFPMLVAFPAYATFYFYILGTFMGNQQDVGDTPVCIIILCFQIDRSVHITMPYSIVKDPTCKRIRTALVFTSHRCKNLFYGFVKYRCFNNKKSMSIFKIFLYSQKNCWLHLKLHKNFITAVGMCCLVEYETHTYTLIVTAQLKLKKNFSIYLLNTLFLVDLNLLYGLFQVMQYFNWDVAQMVEQLHYMLRGSGFDPLHHQIIIISILFSSYQVYGIFANIFCRYILTTFWSLALLGNCSSFSLIKVGSTTQHFVKKSNVEIINMLTTTVAEKFTHVLQPLIHLKQDLCISHQYKYYSHNIKIYKTCKKTFSFDTINTKREAVPTSRGQQCPPKENDGFCLSLIRTNVHSNIFLRMLSSNVLPHHFFMWHILCCQLFFYSLIFTKFFFLIDEKQRLLTLFSFLFNNFDDFSLFLLFLALYSSFQFRPMHLGFEVVPSECSSTSCGLLVRHGVRSRSRKEFFLLNLFLAKFAHKYELHSDRWHHWRKGSRVVLFGSSAYKHREGEGLHQTMGAVLQVMMGIKLIGSLMSLALGGDKGLSSRSLTLEENNAMWAVSDLWWCKWQMRDVVDGWETGFKIKAIVLSDRKVDHEGSCYNISICTLIGAPASLKYLILMFNSLRFTSKNQ

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.480
SRP064423	SRR2545915	Juvenile tuber	3.190
SRP108465	SRR5643513	five period of Gastrodia elata	1.150
	SRR5643514	five period of Gastrodia elata	1.360
	SRR5643515	five period of Gastrodia elata	0.630
	SRR5643524	five period of Gastrodia elata	0.810
	SRR5643525	five period of Gastrodia elata	3.730
	SRR5643528	five period of Gastrodia elata	1.340
	SRR5643658	five period of Gastrodia elata	3.770
	SRR5643659	five period of Gastrodia elata	1.780
	SRR5643660	five period of Gastrodia elata	2.590
	SRR5643661	five period of Gastrodia elata	1.860
	SRR5643662	five period of Gastrodia elata	4.360
	SRR5643663	five period of Gastrodia elata	4.270
	SRR5643664	five period of Gastrodia elata	5.600
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.010
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.390
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.760
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.370
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.580
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.830
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.830
SRP279888	Gastro	Gastrodia elata tuber	10.08
	Juven	Juvenile tuber	1.11
	Mother_Gastro	Mother tuber of Gastrodia elata	2.61
	Mother_Juven	Mother tuber of Juvenile	0.85