Detail information of GWHGAAEX003480/evm.TU.scaffold_135.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672120764|ref|XP_008783658.1|3.67E-138PREDICTED: protein TONNEAU 1a-like [Phoenix dactylifera]
Swissprottr|Q9FQ24|TON1B_ARATH1.00E-109Protein TONNEAU 1b
trEMBLtr|I3SXX9|I3SXX9_LOTJA6.00E-133Uncharacterized protein {ECO:0000313|EMBL:AFK45121.1}
TAIRAT3G550007.00E-36tonneau family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013318436301878983-
Transcript Sequence

Network for GWHGAAEX003480

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16045.4LisH_2781043.30E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms104.720
SRR2545915Juvenile tuber110.880
SRP108465SRR5643513five period of Gastrodia elata104.940
SRR5643514five period of Gastrodia elata109.750
SRR5643515five period of Gastrodia elata103.520
SRR5643524five period of Gastrodia elata119.950
SRR5643525five period of Gastrodia elata119.370
SRR5643528five period of Gastrodia elata113.920
SRR5643658five period of Gastrodia elata106.880
SRR5643659five period of Gastrodia elata103.210
SRR5643660five period of Gastrodia elata98.780
SRR5643661five period of Gastrodia elata101.560
SRR5643662five period of Gastrodia elata84.470
SRR5643663five period of Gastrodia elata97.640
SRR5643664five period of Gastrodia elata85.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_183.280
SRR6049655Rhizomagastrodiae_C368-T10_good_180.210
SRR6049656Rhizomagastrodiae_C368-T07_good_192.590
SRR6049657Rhizomagastrodiae_C368-T07_good_179.120
SRR6049658Rhizomagastrodiae_C368-T04_good_174.540
SRR6049659Rhizomagastrodiae_C368-T04_good_176.310
SRR6049660Rhizomagastrodiae_C368-T01_good_178.090
SRR6049661Rhizomagastrodiae_C368-T04_good_171.690
SRR6049662Rhizomagastrodiae_C368-T01_good_188.320
SRR6049663Rhizomagastrodiae_C368-T01_good_193.730
SRR6049664Rhizomagastrodiae_C368-T10_good_1105.250
SRR6049665Rhizomagastrodiae_C368-T10_good_1105.250
SRP279888GastroGastrodia elata tuber 143.52
JuvenJuvenile tuber169.30
Mother_GastroMother tuber of Gastrodia elata 140.15
Mother_JuvenMother tuber of Juvenile 175.34