Detail information of GWHGAAEX003484/evm.TU.scaffold_135.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13052.00E-74Amino acid transporter protein
nrgi|326504844|dbj|BAK06713.1|1.89E-83predicted protein [Hordeum vulgare subsp. vulgare]
trEMBLtr|F2EH91|F2EH91_HORVD7.00E-84Predicted protein {ECO:0000313|EMBL:BAK06713.1}
TAIRAT3G303902.00E-74Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013321782322190354-
Transcript Sequence

Network for GWHGAAEX003484

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans942641.60E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14207SLC38A2, SNAT2 Protein digestion and absorption map04974
Glutamatergic synapsemap04724
GABAergic synapsemap04727

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.550
SRR6049655Rhizomagastrodiae_C368-T10_good_18.920
SRR6049656Rhizomagastrodiae_C368-T07_good_113.260
SRR6049657Rhizomagastrodiae_C368-T07_good_18.100
SRR6049658Rhizomagastrodiae_C368-T04_good_115.040
SRR6049659Rhizomagastrodiae_C368-T04_good_121.760
SRR6049660Rhizomagastrodiae_C368-T01_good_117.210
SRR6049661Rhizomagastrodiae_C368-T04_good_117.350
SRR6049662Rhizomagastrodiae_C368-T01_good_129.070
SRR6049663Rhizomagastrodiae_C368-T01_good_121.960
SRR6049664Rhizomagastrodiae_C368-T10_good_110.350
SRR6049665Rhizomagastrodiae_C368-T10_good_110.350
SRP279888GastroGastrodia elata tuber 22.31
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 11.00
Mother_JuvenMother tuber of Juvenile 0.00