Detail information of GWHGAAEX003488/evm.TU.scaffold_135.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434403375|ref|YP_007146260.1|2.00E-77putative ferric reductase [Cylindrospermum stagnale PCC 7417]
KOGKOG00390Ferric reductase, NADH/NADPH oxidase and related proteins
nrgi|695075169|ref|XP_009384814.1|0PREDICTED: putative respiratory burst oxidase homolog protein H [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FJD6|RBOHH_ARATH0Putative respiratory burst oxidase homolog protein H
trEMBLtr|K3XEH3|K3XEH3_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si000290m}
TAIRAT5G600100ferric reductase-like transmembrane component family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013323014482305735+
Transcript Sequence

Network for GWHGAAEX003488

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08414.9NADPH_Ox411401.30E-32
PF01794.18Ferric_reduct3004561.30E-20
PF08022.11FAD_binding_84996201.00E-29
PF08030.11NAD_binding_66277956.70E-49
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0005509Molecular Functioncalcium ion binding
GO:0004601Molecular Functionperoxidase activity
GO:0016491Molecular Functionoxidoreductase activity
GO:0050664Molecular Functionoxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.550
SRR2545915Juvenile tuber0.570
SRP108465SRR5643513five period of Gastrodia elata0.900
SRR5643514five period of Gastrodia elata1.780
SRR5643515five period of Gastrodia elata0.960
SRR5643524five period of Gastrodia elata1.440
SRR5643525five period of Gastrodia elata25.960
SRR5643528five period of Gastrodia elata16.320
SRR5643658five period of Gastrodia elata9.780
SRR5643659five period of Gastrodia elata2.900
SRR5643660five period of Gastrodia elata0.480
SRR5643661five period of Gastrodia elata0.780
SRR5643662five period of Gastrodia elata0.650
SRR5643663five period of Gastrodia elata0.430
SRR5643664five period of Gastrodia elata1.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.060
SRR6049655Rhizomagastrodiae_C368-T10_good_12.640
SRR6049656Rhizomagastrodiae_C368-T07_good_11.870
SRR6049657Rhizomagastrodiae_C368-T07_good_11.610
SRR6049658Rhizomagastrodiae_C368-T04_good_10.980
SRR6049659Rhizomagastrodiae_C368-T04_good_10.730
SRR6049660Rhizomagastrodiae_C368-T01_good_10.890
SRR6049661Rhizomagastrodiae_C368-T04_good_12.290
SRR6049662Rhizomagastrodiae_C368-T01_good_12.870
SRR6049663Rhizomagastrodiae_C368-T01_good_10.900
SRR6049664Rhizomagastrodiae_C368-T10_good_11.900
SRR6049665Rhizomagastrodiae_C368-T10_good_11.900
SRP279888GastroGastrodia elata tuber 1.74
JuvenJuvenile tuber0.91
Mother_GastroMother tuber of Gastrodia elata 1.88
Mother_JuvenMother tuber of Juvenile 1.36