Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|189218303\|ref\|YP_001938945.1\|	6.00E-07	RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
KOG	KOG0107	2.00E-71	Alternative splicing factor SRp20/9G8 (RRM superfamily)
nr	gi\|743884272\|ref\|XP_010909639.1\|	3.84E-118	PREDICTED: serine/arginine-rich splicing factor RS2Z32-like [Elaeis guineensis]
Swissprot	tr\|Q9FYB7\|RSZ32_ARATH	2.00E-85	Serine/arginine-rich splicing factor RS2Z32
trEMBL	tr\|C5XPA0\|C5XPA0_SORBI	1.00E-105	Putative uncharacterized protein Sb03g005500 {ECO:0000313\|EMBL:EES00292.1}
TAIR	AT3G53500	2.00E-71	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain

Scaffold	Start	End	Strand
GWHAAEX00000133	2590401	2593673	+

Transcript Sequence
>GWHTAAEX003494 ATGCCTCGATACAGTGATCGCCATGGAACTACAAGACTATATGTTGGGCGTCTATCTTCAAGAATCCGTTCCCGGGATCTTGAGGATCTTTTCAGCAGATATGGAAGAGTACGAGATGTGGACTTGAAGTACGACTACGCCTTTGTTGAATTTAGTGACCCACGAGACGCTGATGATGCAAGGTATAACTTAGATGGACGGGAATTTTATGGTGGTCGTATTATTGTGGAATTTGCCAGAGGGGGTCCCCGTGGTCCTGGAGGTTCCCGTGAGTATCTTGGGAGGGGTGCACCTCCAGGTTCTGGTCGCTGCTTTAATTGTGGCCTTGATGGACACTGGGCTAGGGACTGCAAGGCTGGAGACTGGAAAAACAAGTGCTATCGCTGTGGCGAAAGAGGACATATTGAGAGGAACTGCCAGAACAGTCCCAAAGATTTAAAACGCGCGCGCAGTTATTCTCGTTCACCAACTCCTCGGCGTGGTAGGAGCCGTAGTCGAAGTTATAGCCGGAGCCGTAGCTACAGCCGGTCCCGGTCTCCGGCGCCGAGGAGGGACAGCCGCTCAAAGAGCCCTCGAGACAGCAGGAGCCCCAGCAGAAGCCCTCCTTCAAAAGGAAGGAAACGCAGCCCATCTCCTTACGGCAGCCGCAGCCCAAGCCCTCGGCCCAAGGACGAGGCTGCCAGAGATGGGTCGGATTACAGCCAGAGCCCAAGGGGAGAGAACAGCAAGAGCCCTGAGAGATCCCCTGCTGCAGAGAGGTACCGAAGCCCCGAAGCCAATGGGGGAAGCCCTAGCCCCAGAGACGATGCTGATCGCCCTTCCCCCAGGGGCAGCGAATCCCCTAGAGACTGA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module4

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00076.21	RRM_1	13	73	1.00E-14
PF00098.22	zf-CCHC	103	118	1.00E-05
PF00098.22	zf-CCHC	124	140	6.60E-05

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K12896	SFRS7	Spliceosome	map03040

GO term	Ontology	Name
GO:0008270	Molecular Function	zinc ion binding
GO:0003676	Molecular Function	nucleic acid binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	51.650
SRP064423	SRR2545915	Juvenile tuber	73.140
SRP108465	SRR5643513	five period of Gastrodia elata	36.040
	SRR5643514	five period of Gastrodia elata	44.260
	SRR5643515	five period of Gastrodia elata	31.800
	SRR5643524	five period of Gastrodia elata	29.210
	SRR5643525	five period of Gastrodia elata	15.720
	SRR5643528	five period of Gastrodia elata	20.380
	SRR5643658	five period of Gastrodia elata	12.130
	SRR5643659	five period of Gastrodia elata	61.650
	SRR5643660	five period of Gastrodia elata	73.280
	SRR5643661	five period of Gastrodia elata	73.310
	SRR5643662	five period of Gastrodia elata	70.260
	SRR5643663	five period of Gastrodia elata	94.580
	SRR5643664	five period of Gastrodia elata	98.490
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	40.960
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	61.310
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	37.800
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	47.020
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	47.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	43.330
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	47.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	38.770
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	46.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	47.430
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	34.040
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	34.040
SRP279888	Gastro	Gastrodia elata tuber	42.27
	Juven	Juvenile tuber	24.96
	Mother_Gastro	Mother tuber of Gastrodia elata	11.45
	Mother_Juven	Mother tuber of Juvenile	18.55