Detail information of GWHGAAEX003496/evm.TU.scaffold_135.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|284039038|ref|YP_003388968.1|6.00E-84GHMP kinase [Spirosoma linguale DSM 74]
nrgi|469473887|gb|AGH33734.1|0mevalonate kinase [Asparagus officinalis]
Swissprottr|Q93ZC9|GLAK1_ARATH0Glucuronokinase 1
trEMBLtr|M4QSS9|M4QSS9_ASPOF0Mevalonate kinase {ECO:0000313|EMBL:AGH33734.1}
TAIRAT5G144700GHMP kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013327452292778076+
Transcript Sequence

Network for GWHGAAEX003496

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00288.25GHMP_kinases_N1131814.80E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K16190GLCAK Metabolic pathways map01100
Pentose and glucuronate interconversionsmap00040
Ascorbate and aldarate metabolismmap00053
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms70.030
SRR2545915Juvenile tuber69.190
SRP108465SRR5643513five period of Gastrodia elata33.350
SRR5643514five period of Gastrodia elata32.710
SRR5643515five period of Gastrodia elata28.400
SRR5643524five period of Gastrodia elata27.350
SRR5643525five period of Gastrodia elata17.260
SRR5643528five period of Gastrodia elata11.260
SRR5643658five period of Gastrodia elata15.840
SRR5643659five period of Gastrodia elata36.300
SRR5643660five period of Gastrodia elata38.590
SRR5643661five period of Gastrodia elata30.720
SRR5643662five period of Gastrodia elata32.900
SRR5643663five period of Gastrodia elata37.900
SRR5643664five period of Gastrodia elata42.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.890
SRR6049655Rhizomagastrodiae_C368-T10_good_138.210
SRR6049656Rhizomagastrodiae_C368-T07_good_138.890
SRR6049657Rhizomagastrodiae_C368-T07_good_152.020
SRR6049658Rhizomagastrodiae_C368-T04_good_142.210
SRR6049659Rhizomagastrodiae_C368-T04_good_147.620
SRR6049660Rhizomagastrodiae_C368-T01_good_142.640
SRR6049661Rhizomagastrodiae_C368-T04_good_140.690
SRR6049662Rhizomagastrodiae_C368-T01_good_131.580
SRR6049663Rhizomagastrodiae_C368-T01_good_135.950
SRR6049664Rhizomagastrodiae_C368-T10_good_134.820
SRR6049665Rhizomagastrodiae_C368-T10_good_134.820
SRP279888GastroGastrodia elata tuber 37.53
JuvenJuvenile tuber39.69
Mother_GastroMother tuber of Gastrodia elata 18.74
Mother_JuvenMother tuber of Juvenile 24.25