Gene detail

Detail information of GWHGAAEX003512/evm.TU.scaffold_136.29

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743787074\|ref\|XP_010922330.1\|	3.07E-117	PREDICTED: uncharacterized protein LOC105045665 [Elaeis guineensis]
trEMBL	tr\|M0TX40\|M0TX40_MUSAM	3.00E-107	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P03310_001}
TAIR	AT3G55420	1.00E-79	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000128	1765719	1768640	+

Transcript Sequence
>GWHTAAEX003512 GGGGAGCCACACATACAAACTCGAATTGACTAGAATTCTATCAAGCTTTATCATAATGGGCCTTGTAGCTTGCTGATTAAACCAAATAAAAGGGGAACATGTGAAGACAAGATCATCAAGGGAGTTGCATGAAATAGAGTTAAATTTTTAAGTTTGAGAGCCAGTCAATGTTTTGCTACCTTATTTTCTTGAATAGTGCCTCCCACAATCAAAATCTCTAGCAATAGCCAAAGGTTCAAAAATATCAGTATTAAGACGGCTAAAAAGCAACCATAAATCTATCCTTTGGGACTTTAAATTGTAAGCAAAGACACATGATAATAAGAAGGGAGGATGCACTCTACCATGGATGAGTTGATCAAAAATGTTAATTAGGACAAACTGAGCTTGGGAGTTATCCTAATGGAAAAGTATTCTACTTGGATTTGCAATATGAAAATTGTTGCAACAACCTTCAAATTCTAAAAAAATTCTATTTGGATCTAAATTATGGATCTAAGAAATTTAAATAGTTAATTCTAGTTTCCAGGCAAGCTATCAGAGAAGGCTTGTTTCTCGGAATGAGATTTTTGCAACATAGGATGTGGGTATCTGAGTTGAGCCCTCAGGCATTCTAGTTAACTAAAGGAAATTTAGTCATAAGAACTTGAGGAATAAAAAAAATTAAATACAGGGAGGTAAAAAATTAAACAAAAAATTTCCAAACAGGCTCAGGAAGTGAGCGTATTCTTGGTTTTTTATGGTGGAGGTTTGGAGTTCTTTCTAGTCATCATACACAAAGAGGAAGATGATGTATATTTAGTTGGGTTGGGGACTGATGTGTTCGAGGATCAGTGATTAGGGTAAACATTTTGTTGATTGTAAGGTATTGTTGGTGGAGCGACAATGGTTGAAGAAGCACTTGGAGTAAGCCGAGATGGATGATTATTATTTAAATTAAGGGATCGAGTTTGGGTATTTAGAATTGAAGCTGTACCGCATGATGGGAGGGAGAGGCATGAGGTCTTGGTGAGATTGGCATGTTTATTGGATTTCCAAAAGAGGTGGCTGCAATTGAGGAAAAATAGGAGTAAGTTCTTAAAGGAGGAAGAGAGACCACTATAGATGATGGAGGATTGAAAAGGTTGTTCAGGTATTTCTCGTCGAATCCCCGGTCGAAGAGATCTACCTCGTCGTGTGGTTGTCGGATTAAAGGAGCCACAGTCATAGGATCCTGTATAATTTCTTCAAGTAGAGTGCAAATATTAGTTTCCATTCATAATACAACTTCTGAGATAAGTGATTTTTGTTCATAACCAAATTAAGAGACTCAAGAAAATGTGATTTTGGTGATATTTCCACACAAACACGTGAAAGTAATGCGTTTACGGTAAATCTTGAGGGAGTAGACATTAGTGGCGTGCCGATTTTAATGGCCAAACGAGACAGATATTGATCAAAGCAAAGGGTGTGTGGTAGGTTGGGTAAGCAGATCCAGATCGATAAGGTGTCAGCGAATGTTTTGCCTGGAATAAATGATGGATATCACTTTCTCACTGGGAATGGACAACCAAAAAGAAAATAAGGCCCTTCTTCCTAAACTAGGTCAAGATCTTTGAGATATGCAAAACACGAAATATAAAAGCTTCTTCTTTCCATTGATAAAAGCTCAGGACTACCTTTTAGTTTCCAATGTATATCATCATGGCTGCAGAAGGAGCAGTATATGAATGCTTCTTACCCAAACAGTAGCCGAGGAGACGCGAGCGAGCTCCATAGTTTGGCGCTAACATCTAGCTCTATTTTTCGAAAGCGACATCTGAAATCCTAATTTATAATATGTTTTAAAATTTTTTAAAGTGTAAGGATTCGAGCTTTATCACAGGAGTTCTAATAACAATCTTAAATTATACAGTCGCATTTTATCAAAAATAAATCTCTCATAAAGGAAAACAGACGAGCAAACATTATTGCAAAAGAATTTTCTATTTTGTCATCTTTTGAATACGGCACACGACAGTAAACAGCATTGCCGTATTTATGTTCAGATTTCGAAAGCACCCGCAACCACCGCACTGCAATGGAAGAAAATTCAATAAAGAAGAAAAAACACAAAACCAAGCACCGAGATCCATCCAACCCTCACTTCAAGCCCACATCTGATGTCGAAGGCATCCGATTTGGGGGCCAATTGGTTGTCAAATCCTTTACAGTCCGACGCTCTTCTTCATTAGAACTCCTTCGCCTCCTCTCTATCCCTCCTTTTCAAAGCCAAGTCAATACCGTTCCTTTCCCTTCTACAACCATGTACCTTCCCACCAACTTTACCATTCTCGCCCACCACGCTTGGCACACTCTCACTCTCGGCCTAGGCACCAAAAAGTCCAAAGTTGCGCTCTTTGTGTTCGAGACAGAGACTATGAAGGCCGCTGTTGATCGAATTTGGCCAGCCATGATTCCTCTTGGAGATGTCAACAAGAAATTGATTCGTGGGCTTAGTGGATGTGAAATGGCTAGGTTTAAATTTAGGAAAGGGTGCCTCACTTTCTATATTTTTGCTGTGAGAAGATTGGGAGCTTCTGGCTTTTCCTGTGCTGATGATTTAAAGACAATCTTGGAGTCTGTAGTGGCACTCAAAGATTTTCTTGATCATACTGCTATGCTAGCTTTGCCGAGCCAGAGAAGCATTGCATTCCAGTCTGCTGCTTTCATGGCTATGTAAGGAGCTTGTCACAGTGCTCATGGCGGACAGAAACTATTTTTTCTCTTCAAAGGAATTTCTTCGCTTTGAAATCGATTGCTGAAAATCAGCAAGTTGAGACTTTTCTTTTATTGTTTGATGATCCTTCTTCTTTTTCTTATTCTTCTACTTTTATGTTTTTTGAGCACTATACGTATGTTGTTTCATTTTGTTTTGTAAACTTTTTGCAAATTTAATTTTCT

Network for GWHGAAEX003512

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.430
SRP064423	SRR2545915	Juvenile tuber	0.430
SRP108465	SRR5643513	five period of Gastrodia elata	0.910
	SRR5643514	five period of Gastrodia elata	1.240
	SRR5643515	five period of Gastrodia elata	0.750
	SRR5643524	five period of Gastrodia elata	0.760
	SRR5643525	five period of Gastrodia elata	0.640
	SRR5643528	five period of Gastrodia elata	0.340
	SRR5643658	five period of Gastrodia elata	1.120
	SRR5643659	five period of Gastrodia elata	0.790
	SRR5643660	five period of Gastrodia elata	0.790
	SRR5643661	five period of Gastrodia elata	1.080
	SRR5643662	five period of Gastrodia elata	0.810
	SRR5643663	five period of Gastrodia elata	1.240
	SRR5643664	five period of Gastrodia elata	0.940
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.370
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.310
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.070
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.060
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.490
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.270
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.500
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.500
SRP279888	Gastro	Gastrodia elata tuber	0.89
	Juven	Juvenile tuber	0.46
	Mother_Gastro	Mother tuber of Gastrodia elata	0.26
	Mother_Juven	Mother tuber of Juvenile	0.46