Detail information of GWHGAAEX003521/evm.TU.scaffold_137.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672121262|ref|XP_008783926.1|1.43E-74PREDICTED: protein IQ-DOMAIN 1 [Phoenix dactylifera]
Swissprottr|Q9SF32|IQD1_ARATH6.00E-25Protein IQ-DOMAIN 1
trEMBLtr|V7BU31|V7BU31_PHAVU1.00E-74Uncharacterized protein {ECO:0000313|EMBL:ESW20071.1}
TAIRAT3G150509.00E-60IQ-domain 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001345940893597-
Transcript Sequence

Network for GWHGAAEX003521

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.260
SRR2545915Juvenile tuber119.250
SRP108465SRR5643513five period of Gastrodia elata47.810
SRR5643514five period of Gastrodia elata61.330
SRR5643515five period of Gastrodia elata54.110
SRR5643524five period of Gastrodia elata50.360
SRR5643525five period of Gastrodia elata190.400
SRR5643528five period of Gastrodia elata174.710
SRR5643658five period of Gastrodia elata252.880
SRR5643659five period of Gastrodia elata113.300
SRR5643660five period of Gastrodia elata106.080
SRR5643661five period of Gastrodia elata119.250
SRR5643662five period of Gastrodia elata196.120
SRR5643663five period of Gastrodia elata230.580
SRR5643664five period of Gastrodia elata163.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_170.650
SRR6049655Rhizomagastrodiae_C368-T10_good_171.810
SRR6049656Rhizomagastrodiae_C368-T07_good_164.290
SRR6049657Rhizomagastrodiae_C368-T07_good_163.080
SRR6049658Rhizomagastrodiae_C368-T04_good_135.920
SRR6049659Rhizomagastrodiae_C368-T04_good_136.050
SRR6049660Rhizomagastrodiae_C368-T01_good_154.960
SRR6049661Rhizomagastrodiae_C368-T04_good_140.500
SRR6049662Rhizomagastrodiae_C368-T01_good_161.440
SRR6049663Rhizomagastrodiae_C368-T01_good_158.400
SRR6049664Rhizomagastrodiae_C368-T10_good_160.620
SRR6049665Rhizomagastrodiae_C368-T10_good_160.620
SRP279888GastroGastrodia elata tuber 70.03
JuvenJuvenile tuber42.91
Mother_GastroMother tuber of Gastrodia elata 23.72
Mother_JuvenMother tuber of Juvenile 24.93