Detail information of GWHGAAEX003526/evm.TU.scaffold_137.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|476001797|gb|AGI62040.1|0AP2-4 [Erycina pusilla]
Swissprottr|Q38914|ANT_ARATH8.00E-153AP2-like ethylene-responsive transcription factor ANT
trEMBLtr|M9QS95|M9QS95_9ASPA0AP2-4 {ECO:0000313|EMBL:AGI62040.1}
TAIRAT4G377503.00E-152Integrase-type DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000134963045966510-
Transcript Sequence

Network for GWHGAAEX003526

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP22252841.40E-12
PF00847.19AP23293783.30E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-AP2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.000
SRR2545915Juvenile tuber6.660
SRP108465SRR5643513five period of Gastrodia elata28.360
SRR5643514five period of Gastrodia elata11.400
SRR5643515five period of Gastrodia elata17.160
SRR5643524five period of Gastrodia elata16.930
SRR5643525five period of Gastrodia elata0.180
SRR5643528five period of Gastrodia elata0.150
SRR5643658five period of Gastrodia elata0.320
SRR5643659five period of Gastrodia elata9.930
SRR5643660five period of Gastrodia elata9.820
SRR5643661five period of Gastrodia elata9.590
SRR5643662five period of Gastrodia elata7.570
SRR5643663five period of Gastrodia elata2.510
SRR5643664five period of Gastrodia elata6.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.290
SRR6049655Rhizomagastrodiae_C368-T10_good_17.390
SRR6049656Rhizomagastrodiae_C368-T07_good_17.940
SRR6049657Rhizomagastrodiae_C368-T07_good_15.320
SRR6049658Rhizomagastrodiae_C368-T04_good_14.290
SRR6049659Rhizomagastrodiae_C368-T04_good_13.010
SRR6049660Rhizomagastrodiae_C368-T01_good_14.770
SRR6049661Rhizomagastrodiae_C368-T04_good_17.760
SRR6049662Rhizomagastrodiae_C368-T01_good_112.250
SRR6049663Rhizomagastrodiae_C368-T01_good_15.010
SRR6049664Rhizomagastrodiae_C368-T10_good_18.940
SRR6049665Rhizomagastrodiae_C368-T10_good_18.940
SRP279888GastroGastrodia elata tuber 5.39
JuvenJuvenile tuber18.28
Mother_GastroMother tuber of Gastrodia elata 5.03
Mother_JuvenMother tuber of Juvenile 17.55