Detail information of GWHGAAEX003537/evm.TU.scaffold_137.46
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428319349|ref|YP_007117231.1| | 7.00E-53 | (+)-abscisic acid 8'-hydroxylase [Oscillatoria nigro-viridis PCC 7112] |
| KOG | KOG0157 | 0 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|672201432|ref|XP_008778138.1| | 0 | PREDICTED: cytochrome P450 90B1-like [Phoenix dactylifera] |
| Swissprot | tr|O64989|C90B1_ARATH | 0 | Cytochrome P450 90B1 |
| trEMBL | tr|M0UBC5|M0UBC5_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP22170_001} |
| TAIR | AT3G50660 | 0 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000134 | 2355268 | 2373744 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003537
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 32 | 444 | 8.80E-57 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP90B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09587 | CYP90B1, DWF4 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Brassinosteroid biosynthesis | map00905 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.240 |
| SRR2545915 | Juvenile tuber | 2.930 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 82.320 |
| SRR5643514 | five period of Gastrodia elata | 36.080 | |
| SRR5643515 | five period of Gastrodia elata | 54.900 | |
| SRR5643524 | five period of Gastrodia elata | 32.220 | |
| SRR5643525 | five period of Gastrodia elata | 0.350 | |
| SRR5643528 | five period of Gastrodia elata | 0.280 | |
| SRR5643658 | five period of Gastrodia elata | 0.170 | |
| SRR5643659 | five period of Gastrodia elata | 0.780 | |
| SRR5643660 | five period of Gastrodia elata | 4.820 | |
| SRR5643661 | five period of Gastrodia elata | 2.060 | |
| SRR5643662 | five period of Gastrodia elata | 3.080 | |
| SRR5643663 | five period of Gastrodia elata | 1.270 | |
| SRR5643664 | five period of Gastrodia elata | 2.480 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 51.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 54.150 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 34.480 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 31.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.330 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 20.980 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.610 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.810 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.250 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.400 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 72.630 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 72.630 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.78 |
| Juven | Juvenile tuber | 12.63 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.83 | |
| Mother_Juven | Mother tuber of Juvenile | 17.29 |