Detail information of GWHGAAEX003540/evm.TU.scaffold_137.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116622785|ref|YP_824941.1|9.00E-66FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Candidatus Solibacter usitatus Ellin6076]
KOGKOG13360Monodehydroascorbate/ferredoxin reductase
nrgi|695032720|ref|XP_009403917.1|0PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LK94|MDAR2_ARATH0Probable monodehydroascorbate reductase, cytoplasmic isoform 2
trEMBLtr|M0T5G0|M0T5G0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P09110_001}
TAIRAT3G278200monodehydroascorbate reductase 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013426361642668896-
Transcript Sequence

Network for GWHGAAEX003540

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.13Pyr_redox_273431.10E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08232E1.6.5.4 Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.040
SRR2545915Juvenile tuber12.300
SRP108465SRR5643513five period of Gastrodia elata14.910
SRR5643514five period of Gastrodia elata16.490
SRR5643515five period of Gastrodia elata16.730
SRR5643524five period of Gastrodia elata18.420
SRR5643525five period of Gastrodia elata20.460
SRR5643528five period of Gastrodia elata26.100
SRR5643658five period of Gastrodia elata32.860
SRR5643659five period of Gastrodia elata11.830
SRR5643660five period of Gastrodia elata12.720
SRR5643661five period of Gastrodia elata13.110
SRR5643662five period of Gastrodia elata12.920
SRR5643663five period of Gastrodia elata11.690
SRR5643664five period of Gastrodia elata13.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.910
SRR6049655Rhizomagastrodiae_C368-T10_good_110.090
SRR6049656Rhizomagastrodiae_C368-T07_good_116.320
SRR6049657Rhizomagastrodiae_C368-T07_good_115.960
SRR6049658Rhizomagastrodiae_C368-T04_good_116.030
SRR6049659Rhizomagastrodiae_C368-T04_good_119.610
SRR6049660Rhizomagastrodiae_C368-T01_good_117.170
SRR6049661Rhizomagastrodiae_C368-T04_good_114.800
SRR6049662Rhizomagastrodiae_C368-T01_good_116.410
SRR6049663Rhizomagastrodiae_C368-T01_good_115.290
SRR6049664Rhizomagastrodiae_C368-T10_good_117.450
SRR6049665Rhizomagastrodiae_C368-T10_good_117.450
SRP279888GastroGastrodia elata tuber 14.32
JuvenJuvenile tuber19.91
Mother_GastroMother tuber of Gastrodia elata 23.21
Mother_JuvenMother tuber of Juvenile 22.12