Detail information of GWHGAAEX003541/evm.TU.scaffold_138.1
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|311104978|ref|YP_003977831.1| | 2.00E-47 | maleylacetoacetate isomerase 1 [Achromobacter xylosoxidans A8] |
| KOG | KOG0868 | 2.00E-80 | Glutathione S-transferase |
| nr | gi|672194019|ref|XP_008776183.1| | 1.34E-103 | PREDICTED: glutathione S-transferase zeta class-like [Phoenix dactylifera] |
| Swissprot | tr|P57108|GSTZ_EUPES | 5.00E-84 | Glutathione S-transferase zeta class |
| trEMBL | tr|M0TUL0|M0TUL0_MUSAM | 4.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P29070_001} |
| TAIR | AT2G02390 | 2.00E-80 | glutathione S-transferase zeta 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000143 | 2015 | 20086 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003541
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13417.5 | GST_N_3 | 8 | 83 | 1.90E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01800 | maiA, GSTZ1 | Metabolic pathways | map01100 |
| Microbial metabolism in diverse environments | map01120 | ||
| Tyrosine metabolism | map00350 | ||
| Styrene degradation | map00643 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009072 | Biological Process | aromatic amino acid family metabolic process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 33.580 |
| SRR2545915 | Juvenile tuber | 24.470 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 25.930 |
| SRR5643514 | five period of Gastrodia elata | 31.870 | |
| SRR5643515 | five period of Gastrodia elata | 28.380 | |
| SRR5643524 | five period of Gastrodia elata | 29.570 | |
| SRR5643525 | five period of Gastrodia elata | 16.540 | |
| SRR5643528 | five period of Gastrodia elata | 1.750 | |
| SRR5643658 | five period of Gastrodia elata | 9.600 | |
| SRR5643659 | five period of Gastrodia elata | 3.940 | |
| SRR5643660 | five period of Gastrodia elata | 3.200 | |
| SRR5643661 | five period of Gastrodia elata | 22.940 | |
| SRR5643662 | five period of Gastrodia elata | 2.590 | |
| SRR5643663 | five period of Gastrodia elata | 3.210 | |
| SRR5643664 | five period of Gastrodia elata | 2.710 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.630 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.100 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.930 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.770 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.100 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.360 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.340 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.040 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 5.620 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 5.620 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.00 |
| Juven | Juvenile tuber | 12.62 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.37 | |
| Mother_Juven | Mother tuber of Juvenile | 12.99 |