Detail information of GWHGAAEX003547/evm.TU.scaffold_138.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42490Uncharacterized conserved protein
nrgi|695080729|ref|XP_009387844.1|0PREDICTED: UPF0420 protein C16orf58 homolog [Musa acuminata subsp. malaccensis]
Swissprottr|Q93YU2|RUS6_ARATH0Protein root UVB sensitive 6 {ECO:0000303|PubMed:19515790}
trEMBLtr|M0UB36|M0UB36_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP21280_001}
TAIRAT5G498200Protein of unknown function, DUF647

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000143382871476287-
Transcript Sequence

Network for GWHGAAEX003547

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04884.13DUF6471273558.40E-66
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.300
SRR2545915Juvenile tuber21.080
SRP108465SRR5643513five period of Gastrodia elata14.090
SRR5643514five period of Gastrodia elata11.620
SRR5643515five period of Gastrodia elata10.960
SRR5643524five period of Gastrodia elata11.670
SRR5643525five period of Gastrodia elata11.280
SRR5643528five period of Gastrodia elata10.120
SRR5643658five period of Gastrodia elata13.100
SRR5643659five period of Gastrodia elata9.450
SRR5643660five period of Gastrodia elata10.270
SRR5643661five period of Gastrodia elata9.710
SRR5643662five period of Gastrodia elata9.920
SRR5643663five period of Gastrodia elata8.340
SRR5643664five period of Gastrodia elata10.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.740
SRR6049655Rhizomagastrodiae_C368-T10_good_17.760
SRR6049656Rhizomagastrodiae_C368-T07_good_113.740
SRR6049657Rhizomagastrodiae_C368-T07_good_117.330
SRR6049658Rhizomagastrodiae_C368-T04_good_119.280
SRR6049659Rhizomagastrodiae_C368-T04_good_119.860
SRR6049660Rhizomagastrodiae_C368-T01_good_116.290
SRR6049661Rhizomagastrodiae_C368-T04_good_117.230
SRR6049662Rhizomagastrodiae_C368-T01_good_113.610
SRR6049663Rhizomagastrodiae_C368-T01_good_113.470
SRR6049664Rhizomagastrodiae_C368-T10_good_114.840
SRR6049665Rhizomagastrodiae_C368-T10_good_114.840
SRP279888GastroGastrodia elata tuber 11.66
JuvenJuvenile tuber19.81
Mother_GastroMother tuber of Gastrodia elata 24.42
Mother_JuvenMother tuber of Juvenile 32.55