Detail information of GWHGAAEX003553/evm.TU.scaffold_138.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41482.00E-07Uncharacterized conserved protein
nrgi|568833626|ref|XP_006470986.1|3.83E-43PREDICTED: COX assembly mitochondrial protein 1-like [Citrus sinensis]
trEMBLtr|A0A067DR89|A0A067DR89_CITSI1.00E-43Uncharacterized protein {ECO:0000313|EMBL:KDO45514.1}
TAIRHS99101842.00E-07Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000143867651873875+
Transcript Sequence

Network for GWHGAAEX003553

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08583.9Cmc11101795.30E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.830
SRR2545915Juvenile tuber12.370
SRP108465SRR5643513five period of Gastrodia elata6.900
SRR5643514five period of Gastrodia elata5.940
SRR5643515five period of Gastrodia elata8.730
SRR5643524five period of Gastrodia elata3.910
SRR5643525five period of Gastrodia elata5.670
SRR5643528five period of Gastrodia elata15.970
SRR5643658five period of Gastrodia elata7.640
SRR5643659five period of Gastrodia elata6.350
SRR5643660five period of Gastrodia elata5.460
SRR5643661five period of Gastrodia elata5.690
SRR5643662five period of Gastrodia elata7.770
SRR5643663five period of Gastrodia elata4.690
SRR5643664five period of Gastrodia elata4.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.640
SRR6049655Rhizomagastrodiae_C368-T10_good_10.650
SRR6049656Rhizomagastrodiae_C368-T07_good_12.840
SRR6049657Rhizomagastrodiae_C368-T07_good_15.700
SRR6049658Rhizomagastrodiae_C368-T04_good_14.630
SRR6049659Rhizomagastrodiae_C368-T04_good_14.820
SRR6049660Rhizomagastrodiae_C368-T01_good_14.540
SRR6049661Rhizomagastrodiae_C368-T04_good_14.420
SRR6049662Rhizomagastrodiae_C368-T01_good_13.180
SRR6049663Rhizomagastrodiae_C368-T01_good_14.980
SRR6049664Rhizomagastrodiae_C368-T10_good_14.960
SRR6049665Rhizomagastrodiae_C368-T10_good_14.960
SRP279888GastroGastrodia elata tuber 9.81
JuvenJuvenile tuber2.91
Mother_GastroMother tuber of Gastrodia elata 12.50
Mother_JuvenMother tuber of Juvenile 12.37