Detail information of GWHGAAEX003556/evm.TU.scaffold_138.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479130684|ref|YP_005070644.1|9.00E-39TPR domain protein [Arthrospira platensis NIES-39]
nrgi|720016017|ref|XP_010261020.1|1.35E-123PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Nelumbo nucifera]
Swissprottr|Q9LQ32|GXM3_ARATH5.00E-112Glucuronoxylan 4-O-methyltransferase 3
trEMBLtr|A0A067DHU4|A0A067DHU4_CITSI5.00E-119Uncharacterized protein {ECO:0000313|EMBL:KDO42443.1}
TAIRAT1G338002.00E-111Protein of unknown function (DUF579)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000143881907882758-
Transcript Sequence

Network for GWHGAAEX003556

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04669.12Polysacc_synt_4882683.70E-69
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045492Biological Processxylan biosynthetic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.430
SRR2545915Juvenile tuber7.020
SRP108465SRR5643513five period of Gastrodia elata5.450
SRR5643514five period of Gastrodia elata4.680
SRR5643515five period of Gastrodia elata3.630
SRR5643524five period of Gastrodia elata3.570
SRR5643525five period of Gastrodia elata37.020
SRR5643528five period of Gastrodia elata25.780
SRR5643658five period of Gastrodia elata118.620
SRR5643659five period of Gastrodia elata2.080
SRR5643660five period of Gastrodia elata2.770
SRR5643661five period of Gastrodia elata1.910
SRR5643662five period of Gastrodia elata3.780
SRR5643663five period of Gastrodia elata2.570
SRR5643664five period of Gastrodia elata1.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.060
SRR6049655Rhizomagastrodiae_C368-T10_good_15.460
SRR6049656Rhizomagastrodiae_C368-T07_good_15.710
SRR6049657Rhizomagastrodiae_C368-T07_good_13.820
SRR6049658Rhizomagastrodiae_C368-T04_good_13.890
SRR6049659Rhizomagastrodiae_C368-T04_good_13.210
SRR6049660Rhizomagastrodiae_C368-T01_good_13.320
SRR6049661Rhizomagastrodiae_C368-T04_good_16.270
SRR6049662Rhizomagastrodiae_C368-T01_good_17.840
SRR6049663Rhizomagastrodiae_C368-T01_good_17.720
SRR6049664Rhizomagastrodiae_C368-T10_good_19.820
SRR6049665Rhizomagastrodiae_C368-T10_good_19.820
SRP279888GastroGastrodia elata tuber 6.21
JuvenJuvenile tuber1.16
Mother_GastroMother tuber of Gastrodia elata 2.45
Mother_JuvenMother tuber of Juvenile 1.09