Gene detail

Detail information of GWHGAAEX003572/evm.TU.scaffold_138.54

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|436838561\|ref\|YP_007323777.1\|	5.00E-141	peptidase M16 domain protein [Fibrella aestuarina BUZ 2]
KOG	KOG0959	0	N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily
nr	gi\|743755483\|ref\|XP_010911803.1\|	0	PREDICTED: uncharacterized protein LOC105037879 isoform X1 [Elaeis guineensis]
Swissprot	tr\|P43264\|QCR1_EUGGR	4.00E-12	Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial (Precursor)
trEMBL	tr\|M0TMU7\|M0TMU7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P05440_001}
TAIR	AT5G56730	0	Insulinase (Peptidase family M16) protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000143	1643411	1688218	+

Transcript Sequence
>GWHTAAEX003572 GGATGATCGCCCTCTCAAACTTGAGAGCGGAGTCGAGCTAGCGTCCACTACCCGAGCGCATCGTCACTCGATCTCCCAAATTTTCGTTTCTATCCGGCGCGAGCTTTTCCCTATTTATTCCGATCATCATCCCCTCTCCGACTCCTTGCCTAGCACCGACCATCTTCTTCACAGGCCGTAGGGTTGATATTAGATATTACTTCCGAGATCATCTCAATGGATTTGCTTCCTTCGGAGACACCATCGCTCAGCCGGAGACAGGGCTTTCGGTCGCTGAAGCTTTTGAATGTCTCCATGGACGAACTTCTGTCCGAGGTACCGGTGGGCGTAGACTACGGTGTCCTCGAGAACGGGTTATCTTACTACGTCCGAATCAATCCCAAACCCCGGATGCGCGCCGCACTCGCATTAGCCGTCAAGGTCGGCTCAGTTTTGGAAGAAGAGGAAGAGCGAGGCGTCGCTCACATTGTTGAACATCTTGCTTTTAGTGCAACGAAGAAATATACTAACCATGATATTGTTAAGTTTCTTGAAAGCATTGGGGCTGAGTTTGGTGCTTGTCAGAATGCTTCAACATCATCAGATGAGACAATTTTCGAACTGCTTGTTCCAGTAGACAAACCTGACCTATTATCCCAGGCCATATCTGTTTTGGCAGAATTTAGCTCGGAGGTTCGTGTTTCAGCAAAGGACCTAGAAAAAGAACGTGGAGCTGTTTTCGAAGAGTATAGGGCTGGACGTAATGCTTCAGGTCGGATGCAAGATGCACATTGGACACTAATGTTTGAAGGATCAAAGTATGCTGAACGTTTACCAATTGGGCTAGAAAAAGTGATACGAACTGTTACTCCTCAAACTGTCAAGAAATTTTATGATAAGTGGTATCATTTGTACAACATGGCTGTTGTTGCTGTCGGTGATTTTTCTGATACACAGAGTGTGGTTGAATTAATAAGGACTCATTTTGGGCACAAGGTATCACTTTCTCAGCCTCCTCTAAATATACCAGAATTTCTTGTACCAGCACATAAAGAACCCCGTTTCTCATGCTTTGTTGAATCTGAAGCCTCTGGATCTGCAGTTATGATCAGCTGCAAGATTCGAGTGGATGAGATGAAAACAGTAAAAAATTATCGGAATTCGCTTGCAGAGGCAATGTTTCACTGTGCATTAAATCAGAGGCTCTTCAAGATATCCCGTTGTAAAGATCCACCTTATTTTTCATCCTCTTCAGTAGCAGATGTTTTGGTTCGGCCAGTTAAGGCTTATATAATGACGTCAAGCTGTAAAGAAGGCGGAACAGTTGAGGCACTTGAATCAATGTTGATGGAGGTTGCTCGAATTCGCATTCATGGGTTTTCAGATCGTGAGATATCTATTGTGCGTGCTTTGATGATGTCTGAGATAGAGTCTGCCTTCCTTGAACGAGATCAAATGCAATCAACAACTTTGCGAGATGAATATCTTCAACACTTCTTCCGTAAAGAGCCTGTGATTGGGATCCAGTATGAAGCACAATTACAAAAAACTATTTTGCCATATATTTCTTCTGAGGAGGTATCAAAATTTGCTATGAACTTCTGTGCAACTTGCAGCTGTGTTGTGAAAATAGTTGAACCCCAAGCTCACGCTACACTAGCTGACCTGATGTCTGCTGTATCAAAAGTTCAAGCTTTAGAGAATTCAAGGACAATTCCTCCTTGGTATGATGAGCATGTCCCTGAAGAAATTGTTCTGGACAAGCCAAGTGCAGGGAACATTGTCGAGAAGTTAGTTTTTCCTGACATTGGCGTCACTGAATTGATTTTATCGAATGGTATGAGGGTTTGCTACAAGTACACCGAATTTTTTGATGACCAGGTTATTTTTACGGGTTTTGCATACGGTGGATTATCTGAACTATGTGAAGATGAATATATTTCTTGTTCGATGGGATCAACCATTTCAGGAGAAATTGGTGTATTTGGTTATAAGCCTTCTGTGCTTATGGATATGCTTGCTGGCAAAAGAGCTGAAGTTAGTACAAAAGTTGGAGCATACATGAGAACTTTTTCTGGTGATTGCTCTCCTTCTGATCTGGAAACTGCTTTGCAGCTTGTCTATCAACTCTTTTCTACCAATGTACGACCAAGGGATGAAGAAGTTAAAATAGTAATGCAAATGGCTGAGGAGGCAATTCGAGCACAAGAAAGAGACCCGTACACTGCATTTGCGAATCGTGTTAGGGAGATAAACTATGGGAGCTCCTATTTCTTTAGGCCTATTCAAATTTATGACCTTAAAAAGGTGGATCCCGTAAGAGCATGTGAATATTTCAACAACTGTTTTAAGGACCCCTCTACATTTACAGTTGTCATAGTTGGTAAATTTGATCCGGATACATCTCTTCCGCTGGTATTGCAATACTTGGGTGGAATTCCAAAGCCTTCTGAACCCGTTTTTCATTTTTGCCGTGACGATTTAAAGGGCTTGCCATTTAAGTTTCCAGAAACCATTGTTAGAGAAGTTGTTCGTAGTCAAATGGTAGAGGCTCAGTGTTCTGTCCAGCTAACTTTTCCAGTAGTTTTGAAAAGCGATTCCATGATAGAGGATATTCATTATATTGGGTTTTTGAGCAAATTACTGGAGACTAAAATAATGCAAGTTCTCCGCTTCAAACATGGTCAGATATACTCAGTCGGTGTGTCTGTCTTTCTTGGTGGTAATAAACCTTCACGAACTGGAGATGTATGTGGCGACATAAGCATCAGTTTTTCATGTGATCCGGTTATTTCCTCAAAGCTTGTTGACCTTGCATTAGAAGAGATTTCTCAACTTCAAGAGCATGGGCTAGCTGCTGAAGATGTTTCCACTATACTTGAAATAGAGCAGAGGGCTCATGAAAATGGGTTACAGGAAAATTATTATTGGTTGGATAGAATTTTACGTAGCTATCAGTCACGAGCTTATTTCAATGATCTCAATGCTTCTTTTGAGATTCAAGAAGAAGCGCGAACCAAAGTTAGAAAATGCTTGACTCCATCCTCAATGCTTTTGTCGCTACAAAGATTATTGCCTTCTCCATGCAAAAATCAATATACTTTTGTGATTCTTATGCCAGAGACGTCTCGCATGAAGCTACTAAAATCATCATTGCCATTTTTAAGTTCCATTGAACTTAGCAGGGATGCAAAGATTTTGGCCGGCGCAGCTGGTGGCGTGATCTTAGCCATTACTTTATGGAGAAGCTGCCGGACTGTGCATTGAACTCTTCTTGAGCAGGCTTTTTTCATTGTTTTACTTTTGGATTGCCCTTTGATGAGAGATGACAAATTCTTCAGGCTGGAAATATATTTCTATTTTTTTTCATTTGGATTTTTTTATTTTATTTAATACCAACGAGGAAGCTTGCCACCAGTTTACATTCTTGTGCTGCATCTTTTTTTTTTTTTTTTATATTTTTT

Network for GWHGAAEX003572

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00675.19	Peptidase_M16	56	173	3.40E-23
PF05193.20	Peptidase_M16_C	210	389	1.50E-12
PF05193.20	Peptidase_M16_C	706	879	7.60E-16

Protein Sequence

>GWHPAAEX003572
MDLLPSETPSLSRRQGFRSLKLLNVSMDELLSEVPVGVDYGVLENGLSYYVRINPKPRMRAALALAVKVGSVLEEEEERGVAHIVEHLAFSATKKYTNHDIVKFLESIGAEFGACQNASTSSDETIFELLVPVDKPDLLSQAISVLAEFSSEVRVSAKDLEKERGAVFEEYRAGRNASGRMQDAHWTLMFEGSKYAERLPIGLEKVIRTVTPQTVKKFYDKWYHLYNMAVVAVGDFSDTQSVVELIRTHFGHKVSLSQPPLNIPEFLVPAHKEPRFSCFVESEASGSAVMISCKIRVDEMKTVKNYRNSLAEAMFHCALNQRLFKISRCKDPPYFSSSSVADVLVRPVKAYIMTSSCKEGGTVEALESMLMEVARIRIHGFSDREISIVRALMMSEIESAFLERDQMQSTTLRDEYLQHFFRKEPVIGIQYEAQLQKTILPYISSEEVSKFAMNFCATCSCVVKIVEPQAHATLADLMSAVSKVQALENSRTIPPWYDEHVPEEIVLDKPSAGNIVEKLVFPDIGVTELILSNGMRVCYKYTEFFDDQVIFTGFAYGGLSELCEDEYISCSMGSTISGEIGVFGYKPSVLMDMLAGKRAEVSTKVGAYMRTFSGDCSPSDLETALQLVYQLFSTNVRPRDEEVKIVMQMAEEAIRAQERDPYTAFANRVREINYGSSYFFRPIQIYDLKKVDPVRACEYFNNCFKDPSTFTVVIVGKFDPDTSLPLVLQYLGGIPKPSEPVFHFCRDDLKGLPFKFPETIVREVVRSQMVEAQCSVQLTFPVVLKSDSMIEDIHYIGFLSKLLETKIMQVLRFKHGQIYSVGVSVFLGGNKPSRTGDVCGDISISFSCDPVISSKLVDLALEEISQLQEHGLAAEDVSTILEIEQRAHENGLQENYYWLDRILRSYQSRAYFNDLNASFEIQEEARTKVRKCLTPSSMLLSLQRLLPSPCKNQYTFVILMPETSRMKLLKSSLPFLSSIELSRDAKILAGAAGGVILAITLWRSCRTVH

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0003824	Molecular Function	catalytic activity
GO:0046872	Molecular Function	metal ion binding
GO:0004222	Molecular Function	metalloendopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	38.310
SRP064423	SRR2545915	Juvenile tuber	22.460
SRP108465	SRR5643513	five period of Gastrodia elata	15.670
	SRR5643514	five period of Gastrodia elata	17.670
	SRR5643515	five period of Gastrodia elata	13.810
	SRR5643524	five period of Gastrodia elata	16.320
	SRR5643525	five period of Gastrodia elata	18.020
	SRR5643528	five period of Gastrodia elata	19.730
	SRR5643658	five period of Gastrodia elata	17.340
	SRR5643659	five period of Gastrodia elata	13.370
	SRR5643660	five period of Gastrodia elata	13.800
	SRR5643661	five period of Gastrodia elata	12.700
	SRR5643662	five period of Gastrodia elata	15.550
	SRR5643663	five period of Gastrodia elata	14.890
	SRR5643664	five period of Gastrodia elata	15.150
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	19.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.420
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.490
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	29.940
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	29.710
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.670
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	22.550
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	17.590
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.880
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.880
SRP279888	Gastro	Gastrodia elata tuber	18.06
	Juven	Juvenile tuber	17.20
	Mother_Gastro	Mother tuber of Gastrodia elata	17.12
	Mother_Juven	Mother tuber of Juvenile	24.20