Detail information of GWHGAAEX003579/evm.TU.scaffold_138.61
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|297569221|ref|YP_003690565.1| | 6.00E-144 | pyruvate kinase [Desulfurivibrio alkaliphilus AHT2] |
| KOG | KOG2323 | 0 | Pyruvate kinase |
| nr | gi|743796678|ref|XP_010924790.1| | 0 | PREDICTED: plastidial pyruvate kinase 2 [Elaeis guineensis] |
| Swissprot | tr|Q9FLW9|PKP2_ARATH | 0 | Plastidial pyruvate kinase 2 (Precursor) |
| trEMBL | tr|M0TKF8|M0TKF8_MUSAM | 0 | Pyruvate kinase {ECO:0000256|RuleBase:RU000504} |
| TAIR | AT5G52920 | 0 | plastidic pyruvate kinase beta subunit 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000143 | 2011289 | 2037074 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003579
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00224.20 | PK | 157 | 492 | 1.60E-115 |
| PF02887.15 | PK_C | 513 | 607 | 4.80E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006096 | Biological Process | glycolytic process |
| GO:0004743 | Molecular Function | pyruvate kinase activity |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0030955 | Molecular Function | potassium ion binding |
| GO:0000287 | Molecular Function | magnesium ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 180.470 |
| SRR2545915 | Juvenile tuber | 311.020 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 152.010 |
| SRR5643514 | five period of Gastrodia elata | 178.310 | |
| SRR5643515 | five period of Gastrodia elata | 160.030 | |
| SRR5643524 | five period of Gastrodia elata | 172.750 | |
| SRR5643525 | five period of Gastrodia elata | 65.850 | |
| SRR5643528 | five period of Gastrodia elata | 54.000 | |
| SRR5643658 | five period of Gastrodia elata | 53.630 | |
| SRR5643659 | five period of Gastrodia elata | 168.500 | |
| SRR5643660 | five period of Gastrodia elata | 153.190 | |
| SRR5643661 | five period of Gastrodia elata | 287.690 | |
| SRR5643662 | five period of Gastrodia elata | 193.510 | |
| SRR5643663 | five period of Gastrodia elata | 188.410 | |
| SRR5643664 | five period of Gastrodia elata | 199.130 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 158.950 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 116.580 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 163.550 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 159.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 158.800 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 166.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 146.640 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 167.790 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 160.850 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 169.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 156.960 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 156.960 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 268.81 |
| Juven | Juvenile tuber | 163.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 58.64 | |
| Mother_Juven | Mother tuber of Juvenile | 108.03 |