Detail information of GWHGAAEX003582/evm.TU.scaffold_138.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|563697372|ref|YP_008870122.1|1.00E-11soluble cytochrome b558 [candidate division WWE3 bacterium RAAC2_WWE3_1]
KOGKOG05371.00E-40Cytochrome b5
nrgi|672157891|ref|XP_008798668.1|1.73E-51PREDICTED: cytochrome b5-like isoform X1 [Phoenix dactylifera]
Swissprottr|O22704|CYP5F_ARATH3.00E-41Cytochrome B5-like protein {ECO:0000303|PubMed:19054355}
trEMBLtr|M0TXP1|M0TXP1_MUSAM2.00E-51Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P05320_001}
TAIRAT1G606601.00E-40cytochrome B5-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014322805412290006-
Transcript Sequence

Network for GWHGAAEX003582

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00173.27Cyt-b5451155.00E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0020037Molecular Functionheme binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.360
SRR2545915Juvenile tuber34.820
SRP108465SRR5643513five period of Gastrodia elata32.850
SRR5643514five period of Gastrodia elata35.450
SRR5643515five period of Gastrodia elata29.620
SRR5643524five period of Gastrodia elata32.340
SRR5643525five period of Gastrodia elata45.720
SRR5643528five period of Gastrodia elata36.440
SRR5643658five period of Gastrodia elata48.550
SRR5643659five period of Gastrodia elata25.110
SRR5643660five period of Gastrodia elata25.450
SRR5643661five period of Gastrodia elata21.700
SRR5643662five period of Gastrodia elata26.070
SRR5643663five period of Gastrodia elata31.320
SRR5643664five period of Gastrodia elata26.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.240
SRR6049655Rhizomagastrodiae_C368-T10_good_114.570
SRR6049656Rhizomagastrodiae_C368-T07_good_130.940
SRR6049657Rhizomagastrodiae_C368-T07_good_130.060
SRR6049658Rhizomagastrodiae_C368-T04_good_127.940
SRR6049659Rhizomagastrodiae_C368-T04_good_124.670
SRR6049660Rhizomagastrodiae_C368-T01_good_128.060
SRR6049661Rhizomagastrodiae_C368-T04_good_125.110
SRR6049662Rhizomagastrodiae_C368-T01_good_128.670
SRR6049663Rhizomagastrodiae_C368-T01_good_125.800
SRR6049664Rhizomagastrodiae_C368-T10_good_129.050
SRR6049665Rhizomagastrodiae_C368-T10_good_129.050
SRP279888GastroGastrodia elata tuber 40.53
JuvenJuvenile tuber24.60
Mother_GastroMother tuber of Gastrodia elata 22.39
Mother_JuvenMother tuber of Juvenile 14.27