Detail information of GWHGAAEX003585/evm.TU.scaffold_138.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479205632|ref|YP_007833922.1|3.00E-27ABC-type multidrug transport system, ATPase and permease components [Megamonas hypermegale ART12/1]
KOGKOG00551.00E-34Multidrug/pheromone exporter, ABC superfamily
nrgi|643735787|gb|KDP42295.1|4.42E-38hypothetical protein JCGZ_01619 [Jatropha curcas]
Swissprottr|Q9SGY1|AB10B_ARATH4.00E-35ABC transporter B family member 10
trEMBLtr|A0A067LCT2|A0A067LCT2_JATCU2.00E-38Uncharacterized protein {ECO:0000313|EMBL:KDP42295.1}
TAIRAT1G106801.00E-34P-glycoprotein 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014324112962449736+
Transcript Sequence

Network for GWHGAAEX003585

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.26ABC_tran2573103.70E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05658ABCB1, CD243 ABC transporters map02010
Bile secretionmap04976

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding
GO:0016887Molecular FunctionATPase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.160
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.080
SRR5643662five period of Gastrodia elata0.080
SRR5643663five period of Gastrodia elata0.060
SRR5643664five period of Gastrodia elata0.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.090
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.230
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.19
Mother_JuvenMother tuber of Juvenile 0.00