Detail information of GWHGAAEX003590/evm.TU.scaffold_138.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743755962|ref|XP_010914262.1|5.98E-82PREDICTED: G-box-binding factor 3-like isoform X1 [Elaeis guineensis]
Swissprottr|P42776|GBF3_ARATH1.00E-58G-box-binding factor 3
trEMBLtr|M0RX63|M0RX63_MUSAM6.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P05050_001}
TAIRAT2G462704.00E-58G-box binding factor 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014326856452694273+
Transcript Sequence

Network for GWHGAAEX003590

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07777.10MFMR4884.10E-22
PF00170.20bZIP_12393011.90E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.760
SRR2545915Juvenile tuber5.440
SRP108465SRR5643513five period of Gastrodia elata3.430
SRR5643514five period of Gastrodia elata6.420
SRR5643515five period of Gastrodia elata3.130
SRR5643524five period of Gastrodia elata4.380
SRR5643525five period of Gastrodia elata7.160
SRR5643528five period of Gastrodia elata8.140
SRR5643658five period of Gastrodia elata14.190
SRR5643659five period of Gastrodia elata6.520
SRR5643660five period of Gastrodia elata7.240
SRR5643661five period of Gastrodia elata6.890
SRR5643662five period of Gastrodia elata6.450
SRR5643663five period of Gastrodia elata8.740
SRR5643664five period of Gastrodia elata6.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.380
SRR6049655Rhizomagastrodiae_C368-T10_good_116.420
SRR6049656Rhizomagastrodiae_C368-T07_good_19.060
SRR6049657Rhizomagastrodiae_C368-T07_good_110.790
SRR6049658Rhizomagastrodiae_C368-T04_good_112.830
SRR6049659Rhizomagastrodiae_C368-T04_good_113.780
SRR6049660Rhizomagastrodiae_C368-T01_good_19.190
SRR6049661Rhizomagastrodiae_C368-T04_good_110.140
SRR6049662Rhizomagastrodiae_C368-T01_good_16.890
SRR6049663Rhizomagastrodiae_C368-T01_good_18.350
SRR6049664Rhizomagastrodiae_C368-T10_good_16.160
SRR6049665Rhizomagastrodiae_C368-T10_good_16.160
SRP279888GastroGastrodia elata tuber 8.14
JuvenJuvenile tuber5.67
Mother_GastroMother tuber of Gastrodia elata 12.36
Mother_JuvenMother tuber of Juvenile 7.79