Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|374314656\|ref\|YP_005061084.1\|	2.00E-07	RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha str. Grapes]
KOG	KOG0118	3.00E-53	FOG: RRM domain
nr	gi\|672142917\|ref\|XP_008795323.1\|	4.29E-90	PREDICTED: serine/arginine-rich splicing factor SR45-like, partial [Phoenix dactylifera]
Swissprot	tr\|Q9SEE9\|SR45_ARATH	1.00E-53	Serine/arginine-rich splicing factor SR45
trEMBL	tr\|A9PFW8\|A9PFW8_POPTR	5.00E-81	Arginine/serine-rich family protein {ECO:0000313\|EMBL:ERP55660.1}
TAIR	AT1G16610	3.00E-53	arginine/serine-rich 45

Scaffold	Start	End	Strand
GWHAAEX00000135	223642	233718	+

Transcript Sequence
>GWHTAAEX003599 GAGCATTTCAACTATGAGGAGCAGTTTGGTGGAACTTATCACGGAACCACCCGCTGAACAGAAGTGAGGCTTTTAGGGTTAAGGCTTGTCTTCCGCTCTTTGCTCCGGGACAGCTACGCAATGGCGAAGCCCGTACGACCTCGGCCGGCAACTTCATCGGGCTCCCGTTCTCGCTCCCGCTCCCGATCTCCTTCCTCTACCTCACGCTCCTTCTCTGGCTCCGATTCCCGCTCGAGGTCGCGCTCCCGCTCCCGTTCGAAGTCCCTGAGCTCGTCCTCTTCCCCCAGCGAGAGCTCCCGGAGTCGGTCCCCTCCGCCTCAGAGAAGAACTCCCCCTGGAGTTGGAAGGAGAGGTCGTTCACCATCACCACAGCCTAAGAGAGTCTCACCCCCCAGGAAAGCATCCCCACCGGTTATCGAATCTGTGGTTCTCCACGTTGATCATCTATCAAGAAATGTCAATGAGGCACATCTGAAAGAGATATTCAGTAATTTTGGCGATGTTGTTAATGTGGAGCTTTCAATGGACAGGAATGTCAACCTTCCTCGTGGTTATGGGTATATTGAATTCAAGAAGAGAACCGATGCTGAGAAAGCCCGTCTTTACATGGATGGAGGCCAAATTGATGGAAATGTGGTATCAGTGAAGTTCACTTTAGCGCAAAGGCAGAAGGCTTCACCACCAAAGGCAATTCCTCCTCCACCAAAAAGAGAAGCACTTCCAAGGGACAAAGCCCTCACTGGACCTGAAAAAGAAGTTCTACCCCGTCCAAGGGAATCTTCTCCACGTCGCAGGCCGCCCTCTCCACCTCGAAGGAGATCTCCTGTTGCAAGTCGCAGACCTGATTCGCCTCCACGCCGTCGACCTGATTCGCCTCCTCGCCGCCGTGTGGATTCTCCAGTCCACCGCCGAGCAGAATCACCTCATCGGCGCGCAGAGACGCCTCCTCGCAGGAAGCCTGCTTCTCCACTTCGAAGGCGCTCTCCCTCTCCTAGGAGGCTCAGATCGCCTGGACGTGTTTCCCCGCGAAGAATGCGTGGCAGTCCTTCACGCAAGCGCTCCCCATTGCCTGTCAGGAGGAGATCACCCATAGCAAGGAGAGTGAGGAGCCCACCAAGGAGATCACCTCCAGTGCGCCGTCGTAGCCGTTCACCTGTTCGGAGACCTGGTCGTTCCCGTTCTCGGTCGGCCTCTCCTCGCAGAGGTCGAGCGCCTCCGAGACGGGGAAGATCTTCGTCTTTCTCTCGATCACCCAGTCCCCGAAAGGTAGTTCGCAAGGTGACAAGAAGTCGCAGCCCAAAAAGGCCGCCTGTTCGAGGAAGATCCCTTAGCAACAGCCCCGCCAGCAGCTCTCCCTCTCCTAAAGGGCCCAAACCATGAGGAACACCACGTGTACGGTAGCAAGTGACGC

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K14325	RNPS1	RNA transport	map03013
K14325	RNPS1	mRNA surveillance pathway	map03015

GO term	Ontology	Name
GO:0003676	Molecular Function	nucleic acid binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	46.590
SRP064423	SRR2545915	Juvenile tuber	51.780
SRP108465	SRR5643513	five period of Gastrodia elata	69.100
	SRR5643514	five period of Gastrodia elata	58.780
	SRR5643515	five period of Gastrodia elata	51.840
	SRR5643524	five period of Gastrodia elata	52.330
	SRR5643525	five period of Gastrodia elata	54.700
	SRR5643528	five period of Gastrodia elata	49.900
	SRR5643658	five period of Gastrodia elata	59.560
	SRR5643659	five period of Gastrodia elata	84.520
	SRR5643660	five period of Gastrodia elata	85.660
	SRR5643661	five period of Gastrodia elata	89.780
	SRR5643662	five period of Gastrodia elata	83.650
	SRR5643663	five period of Gastrodia elata	74.600
	SRR5643664	five period of Gastrodia elata	87.130
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	81.630
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	152.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	87.770
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	82.810
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	90.810
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	87.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	87.740
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	83.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	101.650
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	100.060
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	96.560
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	96.560
SRP279888	Gastro	Gastrodia elata tuber	83.49
	Juven	Juvenile tuber	104.51
	Mother_Gastro	Mother tuber of Gastrodia elata	72.71
	Mother_Juven	Mother tuber of Juvenile	74.64