Detail information of GWHGAAEX003603/evm.TU.scaffold_139.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428779369|ref|YP_007171155.1|0glucose-inhibited division protein A [Dactylococcopsis salina PCC 8305]
KOGKOG23110NAD/FAD-utilizing protein possibly involved in translation
nrgi|743816672|ref|XP_010930707.1|0PREDICTED: protein MTO1 homolog, mitochondrial isoform X2 [Elaeis guineensis]
trEMBLtr|K4AX76|K4AX76_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g068290.2.1}
TAIRAT2G134400glucose-inhibited division family A protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135249995294370+
Transcript Sequence

Network for GWHGAAEX003603

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01134.21GIDA874783.60E-151
PF13932.5GIDA_assoc4826931.10E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0002098Biological ProcesstRNA wobble uridine modification

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.180
SRR2545915Juvenile tuber17.570
SRP108465SRR5643513five period of Gastrodia elata13.150
SRR5643514five period of Gastrodia elata13.800
SRR5643515five period of Gastrodia elata11.860
SRR5643524five period of Gastrodia elata14.310
SRR5643525five period of Gastrodia elata7.250
SRR5643528five period of Gastrodia elata5.610
SRR5643658five period of Gastrodia elata6.100
SRR5643659five period of Gastrodia elata11.750
SRR5643660five period of Gastrodia elata12.340
SRR5643661five period of Gastrodia elata12.510
SRR5643662five period of Gastrodia elata12.680
SRR5643663five period of Gastrodia elata13.190
SRR5643664five period of Gastrodia elata12.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.380
SRR6049655Rhizomagastrodiae_C368-T10_good_121.570
SRR6049656Rhizomagastrodiae_C368-T07_good_113.530
SRR6049657Rhizomagastrodiae_C368-T07_good_118.710
SRR6049658Rhizomagastrodiae_C368-T04_good_114.870
SRR6049659Rhizomagastrodiae_C368-T04_good_116.580
SRR6049660Rhizomagastrodiae_C368-T01_good_114.290
SRR6049661Rhizomagastrodiae_C368-T04_good_114.580
SRR6049662Rhizomagastrodiae_C368-T01_good_114.080
SRR6049663Rhizomagastrodiae_C368-T01_good_113.870
SRR6049664Rhizomagastrodiae_C368-T10_good_114.730
SRR6049665Rhizomagastrodiae_C368-T10_good_114.730
SRP279888GastroGastrodia elata tuber 14.79
JuvenJuvenile tuber22.50
Mother_GastroMother tuber of Gastrodia elata 7.15
Mother_JuvenMother tuber of Juvenile 14.52