Gene detail

Detail information of GWHGAAEX003605/evm.TU.scaffold_139.16

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1303	Amino acid transporters
nr	gi\|672116915\|ref\|XP_008781630.1\|	PREDICTED: amino acid permease 3 [Phoenix dactylifera]
Swissprot	tr\|Q38967\|AAP2_ARATH	Amino acid permease 2
trEMBL	tr\|M0T6I7\|M0T6I7_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P12890_001}
TAIR	AT5G09220	amino acid permease 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000135	311949	314327	-

Transcript Sequence
>GWHTAAEX003605 TTAATAAAAAATAAAACAAAATTCAAAGAGTAATTATCCTTCTAAGATGAGTGCTTAAGCTTCCTTTGATCAGCGGAAGTAATCGTTAAGAGTAATTACATATTATCACTTAATTATATTAATTATATAAAATCAAAGAGTGGTAAGCTAAGCTTGAAGCCGTGAGCTGTGTTATATTCGGATAAAAAAACAGAGCTTTATTCGTTGGCGTTCCTTATCTGCATCTTCCTCCTCCTTTTGGCCAACGCAAATGCCGCTTAGCCACTGAAAATAGTTCAACTACATAGAATAGCTTTCTTTTAGGAGGAATTCAAAAGAGCCAGAGAATACAAAAAAAAGATGGAATATTTGACCGACCGCTCGGGAGAATTATGTGGAGGAGAGGCACAGTGGAGCTTCAGAGTTCAATGATTCTGATCATGGCCTCTTATTTCTTCTCTATAAATACGACTGCTCTAAACCCCCTTTCTTCTCAGCTCACTGTCATCATCTTCTCTGCCTCTCCTTCCCCTTCTGAAGAAAACAATGGAGGTCTCTATACACCAGCAGCCATCGCAGCAGCAGCAGCAGAGACGCGGGGCGATCAAAGGCTTTGACGACGATGGCCGCAACAACAGAACTGGAAGTGTGTGGACTGCGAGCGCGCACATAATAACGGCTGTGATCGGGTCGGGGGTTCTGTCTCTGGCATGGGCAATCGCGCAGCTCGGATGGATCGCAGGTCCCATTGTGATGATCGTATTCTCTTTGGTCATCTACTACACTTCCACTCTGCTATCCGACTGCTACAGAACAGGGGATCCCCTCACCGGAAAACGCAACTACACTTACAGCGCCGCCGTCCATTCCTACCTCGGCGGAACCAAGGTGAAGCTGTGCGGCCTCATCCAGTATCTCAACCTCTTCGGAGTCTCCATCGGCTACACCATTGCTGCTTCCGTCAGCATGATGGCAATCCGGAGATCGAATTGCTTCCACGAGAGAGGGGAAGAGAGCCCCTGCCACGTCTCCAGCACCCCTTACATGATCATATTTGGGATCACCGAGATGATATTCTCGCAGATTCCGGATTTCGATCAGATATGGTGGTTGTCCATCCTGGCGGCCGCCATGTCCTTCACCTACTCCTCCATCGGCCTCGGGCTCGGAATCGCTCAGGTGATCGGTAATGGCGGAATCAGAGGAAGCCTCACGGGAATCAGCGTTGGATTTAGGGTCACTCAGGCGGAGAAGATTTGGCGAAGCCTCCAGGCGTTCGGGGACATCGCCTTCGCCTACTCCTTCTCCATCATCCTGATCGAAATCCAGGACACGATAAGGGAGGGGCGGGCGACGGAGGCGAAGGTGATGAGGAAGGCGTCGGCTTTGAGCGTGGGGGTGACGACGTTCTTCTACATGCTGTGCGGGTGCATGGGGTACGCCGCGTTCGGGGACTCAGCTCCGGGAAACCTCCTCACCGGCTTCGGCTTCTACAACCCCTTCTGGCTCCTCGACGTCGCCAACGTCGCCATCGTCGTCCACCTCGTCGGCGCCTACCAGGTCTTCTGCCAGCCTCTCTTCGCCTTCGTCGAGGGCTGGGCGAGGGCCACCTTTCCCGACTCCCGCCTTGTCTCGAAGGCCGAGATCACCCTCTTCCGCCGCTGCAGAGTCGACCTCTTCCGCCTCCTATGGCGCTCCGCATTCGTGGCGGCCACCACCGTCATCTCCATGATCCTTCCCTTCTTCAATGACGTCGTCGGATTGCTGGGAGCCCTCGGATTCTGGCCCCTCACCGTCTATTTTCCCGTCGAGATGTACATTGTCCAGAAAAAGGTCCCCAAATGGAGCCCCAGATGGGTGTGCCTGCAGATACTCAGTTTGTCCTGTCTCGCCATTTCCGTCTCCGCCGCTGCCGGATCCATCGCTGGAGTCGCCTCCGACCTTGAGCTCTTCCGCCCCTTCAGATCCGGTTCTTGAGCTCCAACAACAACCGCCAGAGAAGAGGAAGCTGCCTTGCCTGCCTGCACGCTCTCTGGTGCTGCAGTTTTTTAACAAGTGTTGTCAGAGGAACGTTATCAATGCTAAAAATGTGTAAAGAGTGAATAATAATACAAAAAAATTGAGTATTGTTATATGTTTCTTAAATATTTTTCAAAATGTATTGATGATTAAGATTTAAAGAATTAAGTGAA

Network for GWHGAAEX003605

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01490.17	Aa_trans	31	462	4.60E-111

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.280
SRP064423	SRR2545915	Juvenile tuber	10.050
SRP108465	SRR5643513	five period of Gastrodia elata	11.170
	SRR5643514	five period of Gastrodia elata	13.940
	SRR5643515	five period of Gastrodia elata	45.300
	SRR5643524	five period of Gastrodia elata	8.630
	SRR5643525	five period of Gastrodia elata	198.740
	SRR5643528	five period of Gastrodia elata	309.470
	SRR5643658	five period of Gastrodia elata	167.110
	SRR5643659	five period of Gastrodia elata	26.020
	SRR5643660	five period of Gastrodia elata	12.350
	SRR5643661	five period of Gastrodia elata	40.150
	SRR5643662	five period of Gastrodia elata	23.910
	SRR5643663	five period of Gastrodia elata	28.720
	SRR5643664	five period of Gastrodia elata	39.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.920
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	23.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.470
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	17.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.620
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	53.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	21.320
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	33.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	37.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.060
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.060
SRP279888	Gastro	Gastrodia elata tuber	15.64
	Juven	Juvenile tuber	3.42
	Mother_Gastro	Mother tuber of Gastrodia elata	48.49
	Mother_Juven	Mother tuber of Juvenile	15.54