Gene detail

Detail information of GWHGAAEX003608/evm.TU.scaffold_139.20

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|383760322\|ref\|YP_005439308.1\|	4.00E-19	SET domain-containing protein [Rubrivivax gelatinosus IL144]
KOG	KOG4442	2.00E-112	Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis
nr	gi\|743816621\|ref\|XP_010930691.1\|	0	PREDICTED: uncharacterized protein LOC105051789 [Elaeis guineensis]
Swissprot	tr\|Q2LAE1\|ASHH2_ARATH	4.00E-135	Histone-lysine N-methyltransferase ASHH2
trEMBL	tr\|M0TYL6\|M0TYL6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P08570_001}
TAIR	AT1G77300	2.00E-112	histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000135	360479	406611	-

Transcript Sequence
>GWHTAAEX003608 ATGGAGATTGAGGATGGCCGGGGTAGCAATGCCTCTCCAGCTTCTGACAATGCCTGCCCTTTGATGGGTTATGAGAGCTATTTCAGTGATTTTCACGAGGAGTCTGAATTAAAGTTGTGCATTCAGTCTTCTTGTCATGGCGATAAATATTCAAACGTGGTGGTCGGAAACAAAGGTTTTGAGAATAAGGAGGAGAGCAATGGTAATGCCTTGGATCATGCAAATTTGTTTGAATTACAAGGCGCATTTATCAAGGAAGATCTTAAGATTGTGGATGAAGAGGCAATGAGGATAATTGCTGAGGATGATCAGGATGACTTTCCTGGGCTGTCTCCTCTGAGAGGAGATTGTGTGACAAGATCTTCCAATATTGGCACCAGAGTTGAAGCGGAGTACTTAATGTTTGATGACGGTAGAGACTGCAATGGTTGCGATAACTTTCTCTTTTCTTCGAGAGTGGATGTTCATGTTCCTTTGGTGGGCGTTGATGGGGATATTTCTAGGCAAAAAGATGGGTTTTATTGTTCGCCTTCATCCAGCAAGTGCTTGCATGCTTCAAAAATCTCATATGGTAGTTCAGTGGATATGAAAATTAGAAATTTATCTAATGTAGAATCTCAAAGATTGAATTTTGACTGCTGCAGTGGTAATGTAGCTAACTTGGCTGACAGAACAACAAAAGACAAGCGACTGTTGCGTTTACAGGATCGCAGTAGCTTGCTTCTTCAACATTCCAGTATGATGAAAGAGACTTATCAGTTTAATAATTTTGTTTGTGTACCTGAAATACAAAATGCTGATGAAGAGATATCAGGAGTTCCACATATTGAACAAGCAAATTTCTCTGCAATGGAAAGAACTATATCTGAGAAGCATTCACGGCCTTCTGCTTTTGCATGTTGTTCAATAGGTGCTGCTGACTTTGGTGTTGAGCGAAATAATTTTGATTCGTTTAATCGAATGTCAACTCCATTTAATAACAACGAATGCTGTATAGAAGCAAAGAAGGCAGTTGGTGCTCTTGCAAATTCTAGTTCTATAGAAATTGTCAGACGCACTAATCCCAAACGCTCTGCTTCATTAAGGAGCAGTTTGGATGATAGAAAATCTAATTTGCTAAGCCCAATCCTCCAAAGAGATGGGAGAAAACGCAGAAGAAAGATCAAAGCCAGTGCTTCACGTGCACTGATTACGCCTAGGATGTTTGCCAGTATTAAAAGAAAAATACGAAATTCTCATAGGCAAGCACGCGTTTCTCTTTGGGGAACGATGGAAAGCTTATTGACCAATTTTAAGCAAAGAGAGGACCCTATAAAGCATGACATAGAATCAATTGCTGTTAAGAAAAGACGATCCAAGATTGCTGGACCAGTTGCCAACAGAAGAAAAAGAACGGCTGCCCTTAAGAACAAACTGTCCGGATTATCATTTAATAAAATACCATTTTCATCTTCTAAATCTATTCCGCCAGTTTTACCTGATACAGAGGCTTTTTTAAAAAATGGTGTAGAACAATCCATGACAACTTCTGATGGGCATATTGCCTCAGAAACTTCTAGCACAAAGTTTATAATAAAGCAAAATTCCTTAGAAAAATGGTATACTGTCAGCTCAAACGCAAGAGGGGGACAGCAGGGGGAAAGGGACATGGATAGCACTTTGACACAAGAAACGTCGGCTGACAATCTCTTATCAGAATGCCATGGAGTTTCATCTCGAGTAAAACTTAATTTTGTTGCAGAAACTGTTGATGATAAACAACCACTAAATTCTGGTAGTTCTCCTGATTCTGATATTTATCACCCTGCTATAGATTCTGGTATCCTGACAGTTGAGGGATCTGCTTTTATTAAACAAGAGCCAAAGGTAAAAGATGGCTTGCCTTGTGCTGAGGGACCTTTTACTGAACTACCTGTAGACTCCTTACCTTCGTTGGAAAAACAAGTGCAACAATGTGAGAATCCAAGATGGAATTGGAAGATCTTACAGAATCAAACTAAAAAGGTAAAGGAAACGAGAGACAAAAAAGGAAAAAAGGAAAAGAAATATAATAAAAAAGGTCAAGTCAATGAACATTCATTTATATTATCTGATTCTTATTGTGCTGAGGAGAGTTTGGATTGTGAGGGAAAATTGAATGAGGTTAAAATAGACTCATTATGCTGTAACTGCTGTTTCAAGGATAAAGGAACATGTGAGAAAGGAGGAAAATGTTCAAATTCTGTTAGAAAGCACTGTAAAAAAGGATCGAAGTCAGAAATGTTTCTCACGCATTCATCTGTTTCTGGAACAAGTTACTTTGGTAACTCTAATAATTGTATAGAAATACAAAGAAAGACAGAGGGCACTAAATTTCATTTGCAGAATGATGACAATGAACAATTAGAAGCATTATTGCCTTCTGATTACATTAATGAGCGTCAAATGCATCCAAGTACTATAAAAAGTTTGCGCAAAAACAAATCAGGTTGCACATTTTCAATTAAGCCAAGGAAAAAATTTATCTATGGTCGACACAAAGGAAGTATACGGAAATCCGACAAAGTTAGGAAGGATAATGTTGTTCCCAAAGAAAATGAAAGCTTGGGATTCTCTTCGGAAACAGCCTGTGAAACTGCTGCGATTGATACTTTGATAAAGGATGCATCAAATGAAGTTACAACATCATACTTCAGTGAGTTTTCTGCAATAGAAATGCACAAGGTTTTATTGAAACAAACTTCACTTTCAGGTAAATTAGCATGGGCTCTTTGTGATGACTGCCAAAAGTGGCGCTGTGTGCCAGATGAGCTTGTGAATGTTATTGAGAAAAGAAGATGGACATGTAAAGACAATGCAGACGAAGCATTTGCTGACTGTACAATTCCACAAGAGAAAACAGATGATGATATTAATCAAGATCTTGGAATTTTTAATGACGAGTATTACTCTACAGAGCTGCATAGTCATGGAAAACTCGCACCACTTGGGCTATCTGCTGCTTCTCAAACCATGTGGACTCGTATCAAATCCAACTTATTTCTTCATCGAAATCGTAGAACACTGAATATTGATGAGATCATGGTCTGCCATTGCAAACCACCTCTGAATGGCAGTTTGGGATGCGATGAGGAATGCTTGAATCGTATGCTTAATATTGAGTGTGTCAAGGGAACCTGCCCATGTGGGAGTCTATGCTCAAATCAACAGTTCCAAAAACGCAAATATACCAAATTCAAGTGGATCAAATGTGGAAAGAAGGGTTATGGGTTGCAATTGGAAGAGAATGTTTCCAGAGGAAAATTTCTTATTGAATATGTTGGGGAGGTGTTAGATATACCTACTTATGAAGCACGATTACGACATTATGCTAGCAGAGGTCAGAAGCATTTCTACTTTATGACGTTGAATGGTGGTGAGGTAATAGATGCATGCACCAAGGGAAACTTGGGGCGTTACGTCAATCATAGTTGTGATCCTAATTGCCGCACTGAAAAGTGGATGGTTAATGGAGAGGTGTGTATTGGGCTGTTTGCGATTCGGGATATCAAAAAGGGCGAAGAAATCACGTTTGATTACAATTATGTAAGGGTGTTTGGTGCTGCAGCTAAGAAATGTGTGTGCGGTTCTGCTGAGTGTCGAGGTTACATAGGTGGTGATCCATCTAGTTCTGAAGTTATTGTACAAGATGATTCAGATGCAGAAGATCTTGAGCCAGTAATGATTGATGAAGATGGGAATGTTGAGCTTGGTGTTGCAGAGAGTGATTCTATTGCAACTGACGCTAAGGTAGCAAACCCTGAAAGCTTAGAGAGGAACGACACAAAATGGACTCCTACCATGTCAGAGCAAGGGGTTTGTGTAGAAAATCATGCTGCTATTTTCTCTGGGTCATCTGAACTTGACCTGACTAATAGTTTGATGCAGTCATTAGATTCTGCAGAATCCAAAAATAATTTGTACAGAATCTCTGAAGGTTCGCCACTCCAGGATCTGTCTTTGAGCATAGAATCTGATCAAAACTTTTGTGAAGTTGCAAATGAGAGTCCACCATCGAGTCCTGCCTTTGTACCTTTACCTCCTGGGCAGTTATCAGAAAGATCTGAGCACAGATTGAATACTTCTTTGCAAAGTGATCGAACAGCGCATGAACAGGTTATGGATAATGCAGCAAGGATTTCTTCAGAAAATTTTGATCCTTTCATGCATAGAAGTAGTTCTGCAGCTTTTGAATCTGTGAAAGCCGTTGGGCATTTAAAAATTAAACGGAGCAGAGTAAACATTAGAAGTGCAGCTTCTGGAAAAACAAAGAAAGTGTCAACTGCTATTAGCACTCGACATATTGAAGGAGTTGAAGAAAAACTTAATGAACTTCTAGATGAGGATGGTGGCATTCTCAGGCAGAAAGATGCTGCTAAAGGATACTTGAAGCTTTTAGTTGTAACAGCTGCTGCAGGGGATGAAACCAGAGGAAGCATGTCTCAGAGTGTTCGAAATCTTTCATTGATTCTCGATGCAATTTTGAAAACGAAGTCTCGAATGGTTTTGGTTGATATAATAAACAAAAATGGGCTGCAAATGCTACACAATATGATGAAACAGAACCGTGAGAACTTTAACCGAATTCCCATTCTTAGAAAGCTTCTTAAGGTCTTGGAATTTCTAGCAGAAAAAGAAATTCTTACTAGGGATCATATATATGCCACTCCTCCTTGCTGTGGAATGGAAAGCTTCAAGGAATCAATGTTGAAGCTTATGAAACATAGGGACTCACAG

Network for GWHGAAEX003608

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07496.14	zf-CW	915	958	7.70E-10
PF00856.27	SET	1115	1187	9.40E-17

Protein Sequence

>GWHPAAEX003608
MEIEDGRGSNASPASDNACPLMGYESYFSDFHEESELKLCIQSSCHGDKYSNVVVGNKGFENKEESNGNALDHANLFELQGAFIKEDLKIVDEEAMRIIAEDDQDDFPGLSPLRGDCVTRSSNIGTRVEAEYLMFDDGRDCNGCDNFLFSSRVDVHVPLVGVDGDISRQKDGFYCSPSSSKCLHASKISYGSSVDMKIRNLSNVESQRLNFDCCSGNVANLADRTTKDKRLLRLQDRSSLLLQHSSMMKETYQFNNFVCVPEIQNADEEISGVPHIEQANFSAMERTISEKHSRPSAFACCSIGAADFGVERNNFDSFNRMSTPFNNNECCIEAKKAVGALANSSSIEIVRRTNPKRSASLRSSLDDRKSNLLSPILQRDGRKRRRKIKASASRALITPRMFASIKRKIRNSHRQARVSLWGTMESLLTNFKQREDPIKHDIESIAVKKRRSKIAGPVANRRKRTAALKNKLSGLSFNKIPFSSSKSIPPVLPDTEAFLKNGVEQSMTTSDGHIASETSSTKFIIKQNSLEKWYTVSSNARGGQQGERDMDSTLTQETSADNLLSECHGVSSRVKLNFVAETVDDKQPLNSGSSPDSDIYHPAIDSGILTVEGSAFIKQEPKVKDGLPCAEGPFTELPVDSLPSLEKQVQQCENPRWNWKILQNQTKKVKETRDKKGKKEKKYNKKGQVNEHSFILSDSYCAEESLDCEGKLNEVKIDSLCCNCCFKDKGTCEKGGKCSNSVRKHCKKGSKSEMFLTHSSVSGTSYFGNSNNCIEIQRKTEGTKFHLQNDDNEQLEALLPSDYINERQMHPSTIKSLRKNKSGCTFSIKPRKKFIYGRHKGSIRKSDKVRKDNVVPKENESLGFSSETACETAAIDTLIKDASNEVTTSYFSEFSAIEMHKVLLKQTSLSGKLAWALCDDCQKWRCVPDELVNVIEKRRWTCKDNADEAFADCTIPQEKTDDDINQDLGIFNDEYYSTELHSHGKLAPLGLSAASQTMWTRIKSNLFLHRNRRTLNIDEIMVCHCKPPLNGSLGCDEECLNRMLNIECVKGTCPCGSLCSNQQFQKRKYTKFKWIKCGKKGYGLQLEENVSRGKFLIEYVGEVLDIPTYEARLRHYASRGQKHFYFMTLNGGEVIDACTKGNLGRYVNHSCDPNCRTEKWMVNGEVCIGLFAIRDIKKGEEITFDYNYVRVFGAAAKKCVCGSAECRGYIGGDPSSSEVIVQDDSDAEDLEPVMIDEDGNVELGVAESDSIATDAKVANPESLERNDTKWTPTMSEQGVCVENHAAIFSGSSELDLTNSLMQSLDSAESKNNLYRISEGSPLQDLSLSIESDQNFCEVANESPPSSPAFVPLPPGQLSERSEHRLNTSLQSDRTAHEQVMDNAARISSENFDPFMHRSSSAAFESVKAVGHLKIKRSRVNIRSAASGKTKKVSTAISTRHIEGVEEKLNELLDEDGGILRQKDAAKGYLKLLVVTAAAGDETRGSMSQSVRNLSLILDAILKTKSRMVLVDIINKNGLQMLHNMMKQNRENFNRIPILRKLLKVLEFLAEKEILTRDHIYATPPCCGMESFKESMLKLMKHRDSQ

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0018024	Molecular Function	histone-lysine N-methyltransferase activity
GO:0008270	Molecular Function	zinc ion binding
GO:0005515	Molecular Function	protein binding
GO:0005634	Cellular Component	nucleus

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	49.090
SRP064423	SRR2545915	Juvenile tuber	33.340
SRP108465	SRR5643513	five period of Gastrodia elata	16.340
	SRR5643514	five period of Gastrodia elata	16.020
	SRR5643515	five period of Gastrodia elata	15.940
	SRR5643524	five period of Gastrodia elata	17.000
	SRR5643525	five period of Gastrodia elata	15.520
	SRR5643528	five period of Gastrodia elata	13.520
	SRR5643658	five period of Gastrodia elata	16.830
	SRR5643659	five period of Gastrodia elata	15.170
	SRR5643660	five period of Gastrodia elata	16.700
	SRR5643661	five period of Gastrodia elata	13.690
	SRR5643662	five period of Gastrodia elata	16.300
	SRR5643663	five period of Gastrodia elata	16.100
	SRR5643664	five period of Gastrodia elata	17.610
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.710
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.370
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	18.410
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	25.520
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.530
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	32.500
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	24.970
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.920
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.670
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.950
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.950
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.950
SRP279888	Gastro	Gastrodia elata tuber	19.67
	Juven	Juvenile tuber	31.36
	Mother_Gastro	Mother tuber of Gastrodia elata	18.26
	Mother_Juven	Mother tuber of Juvenile	31.92