Detail information of GWHGAAEX003609/evm.TU.scaffold_139.21


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135407248407655-
Transcript Sequence

Network for GWHGAAEX003609

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00626E2.3.1.9, atoB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Fatty acid metabolismmap01212
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630
Propanoate metabolismmap00640
Butanoate metabolismmap00650
Carbon fixation pathways in prokaryotesmap00720
Fatty acid degradationmap00071
Synthesis and degradation of ketone bodiesmap00072
Cysteine and methionine metabolismmap00270
Lysine degradationmap00310
Tryptophan metabolismmap00380
Terpenoid backbone biosynthesismap00900
Benzoate degradationmap00362
Two-component systemmap02020

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.010
SRR2545915Juvenile tuber11.790
SRP108465SRR5643513five period of Gastrodia elata16.990
SRR5643514five period of Gastrodia elata23.500
SRR5643515five period of Gastrodia elata18.540
SRR5643524five period of Gastrodia elata19.270
SRR5643525five period of Gastrodia elata18.150
SRR5643528five period of Gastrodia elata11.630
SRR5643658five period of Gastrodia elata16.420
SRR5643659five period of Gastrodia elata16.830
SRR5643660five period of Gastrodia elata17.790
SRR5643661five period of Gastrodia elata18.170
SRR5643662five period of Gastrodia elata16.630
SRR5643663five period of Gastrodia elata16.100
SRR5643664five period of Gastrodia elata34.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.300
SRR6049655Rhizomagastrodiae_C368-T10_good_131.920
SRR6049656Rhizomagastrodiae_C368-T07_good_126.790
SRR6049657Rhizomagastrodiae_C368-T07_good_141.040
SRR6049658Rhizomagastrodiae_C368-T04_good_134.460
SRR6049659Rhizomagastrodiae_C368-T04_good_151.580
SRR6049660Rhizomagastrodiae_C368-T01_good_138.180
SRR6049661Rhizomagastrodiae_C368-T04_good_129.020
SRR6049662Rhizomagastrodiae_C368-T01_good_132.690
SRR6049663Rhizomagastrodiae_C368-T01_good_127.240
SRR6049664Rhizomagastrodiae_C368-T10_good_117.390
SRR6049665Rhizomagastrodiae_C368-T10_good_117.390
SRP279888GastroGastrodia elata tuber 23.45
JuvenJuvenile tuber51.46
Mother_GastroMother tuber of Gastrodia elata 18.50
Mother_JuvenMother tuber of Juvenile 60.62